RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 NUDT18Q6ZVK8 323 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 NRBP1Q9UHY1 535 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 KRT38O76015 456 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 PLIN5Q00G26 463 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 LRRC24Q50LG9 513 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 PNKPQ96T60 521 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 ECT2Q9H8V3 914 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 LCP1P13796 627 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 TMED10P49755 219 aaKnown RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 CBFBQ13951 182 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 C8orf34Q49A92 452 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 AGAP3Q96P47 875 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 EPN3Q9H201 632 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 NHEJ1Q9H9Q4 299 aaPredicted RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 PKP3Q9Y446 797 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 PCDHA13Q9Y5I0 950 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 PSAPP07602 524 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 RALBP11234 206 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 RARS2Q5T160 578 aaKnown RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 USP44Q9H0E7 712 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 CYP19A1P11511 503 aaPredicted RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 MZF1P28698 734 aaPredicted RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 ST13P50502 369 aaKnown RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 ST8SIA6P61647 398 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 MRPS35P82673 323 aaKnown RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 KDSRQ06136 332 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 DYNC1I2Q13409 638 aaKnown RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 ZNF790Q6PG37 636 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 ENO1P06733 434 aaKnown RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 ENO3P13929 434 aaPredicted RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 ADCY2Q08462 1091 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 CDC16Q13042 620 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 PHKG1Q16816 387 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 DDI2Q5TDH0 399 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 IL31Q6EBC2 164 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 MIER2Q8N344 545 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 MB21D1Q8N884 522 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 PBKQ96KB5 322 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 TMEM206Q9H813 350 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 HIST1H2AGP0C0S8 130 aaPredicted RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 PYGMP11217 842 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 HIST1H2ADP20671 130 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMU1-201ENST00000397149 BBS7Q8IWZ6 715 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 DNAJC10Q8IXB1 793 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 ST13P5Q8NFI4 369 aaPredicted RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 SNRNP27Q8WVK2 155 aaKnown RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 HIST1H2AHQ96KK5 128 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 FOPNLQ96NB1 174 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 HIST1H2AJQ99878 128 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 H2AFJQ9BTM1 129 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 MRPL39Q9NYK5 338 aaKnown RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 SPASTQ9UBP0 616 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 FAM107AO95990 144 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 SPRTNQ9H040 489 aaPredicted RBP13.06□□□□□ -0.32
SMU1-201ENST00000397149 LATS2Q9NRM7 1088 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 USP21Q9UK80 565 aa13.06□□□□□ -0.32
SMU1-201ENST00000397149 GAP43P17677 238 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 YWHAZP63104 245 aaKnown RBP13.05□□□□□ -0.32
SMU1-201ENST00000397149 CSNK2BP67870 215 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 PDAP1Q13442 181 aaKnown RBP13.05□□□□□ -0.32
SMU1-201ENST00000397149 ATP11CQ8NB49 1132 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 POLD4Q9HCU8 107 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 DAPK1P53355 1430 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 TYK2P29597 1187 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 GCKRQ14397 625 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 HEATR6Q6AI08 1181 aaKnown RBP13.05□□□□□ -0.32
SMU1-201ENST00000397149 MCTP2Q6DN12 878 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 USP33Q8TEY7 942 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 POLE3Q9NRF9 147 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 ABCC5O15440 1437 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 POTEFA5A3E0 1075 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 XPO1O14980 1071 aaKnown RBP13.05□□□□□ -0.32
SMU1-201ENST00000397149 TRIM48Q8IWZ4 208 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 P2RX5Q93086 422 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 M0QYV0 167 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 DDX5P17844 614 aaKnown RBP13.05□□□□□ -0.32
SMU1-201ENST00000397149 ARFIP2P53365 341 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 FAM81BQ96LP2 452 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 ADAM22Q9P0K1 906 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 TJP2Q9UDY2 1190 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 MYO1CO00159 1063 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 EFHBQ8N7U6 833 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 NARS2Q96I59 477 aaKnown RBP13.05□□□□□ -0.32
SMU1-201ENST00000397149 DHX35Q9H5Z1 703 aaKnown RBP13.05□□□□□ -0.32
SMU1-201ENST00000397149 NUMBP49757 651 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 SEMA3FQ13275 785 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 SCARA3Q6AZY7 606 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 TBCKQ8TEA7 893 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 COQ7Q99807 217 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 NEUROD4Q9HD90 331 aa13.05□□□□□ -0.32
SMU1-201ENST00000397149 GRIK1P39086 918 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 ZNF699Q32M78 642 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 ELMO2Q96JJ3 720 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 APOL5Q9BWW9 433 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 PCDHGA3Q9Y5H0 932 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 ZMYM6O95789 1325 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms