RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 ARF4P18085 180 aaPredicted RBP23.06■■□□□ 1.28
SEC13-207ENST00000397105 LIG1P18858 919 aa23.06■■□□□ 1.28
SEC13-207ENST00000397105 CACNB1Q02641 598 aaPredicted RBP23.06■■□□□ 1.28
SEC13-207ENST00000397105 PRPF4BQ13523 1007 aaKnown RBP23.06■■□□□ 1.28
SEC13-207ENST00000397105 GIT2Q14161 759 aa23.06■■□□□ 1.28
SEC13-207ENST00000397105 RESP18Q5W5W9 173 aa23.06■■□□□ 1.28
SEC13-207ENST00000397105 ZNF598Q86UK7 904 aaKnown RBP23.06■■□□□ 1.28
SEC13-207ENST00000397105 CPB2Q96IY4 423 aa23.06■■□□□ 1.28
SEC13-207ENST00000397105 CCDC113Q9H0I3 377 aa23.06■■□□□ 1.28
SEC13-207ENST00000397105 CUEDC2Q9H467 287 aa23.06■■□□□ 1.28
SEC13-207ENST00000397105 PCDHB2Q9Y5E7 798 aa23.06■■□□□ 1.28
SEC13-207ENST00000397105 A0A1B0GUA9 196 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 B4GALT5O43286 388 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 TBCAO75347 108 aaKnown RBP23.05■■□□□ 1.28
SEC13-207ENST00000397105 FAM13AO94988 1023 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 PRKCBP05771 671 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 ERVK-21P61565 698 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 TMEM132AQ24JP5 1023 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 ADALQ6DHV7 355 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 ABI1Q8IZP0 508 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 MYCT1Q8N699 235 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 PGBD4Q96DM1 585 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 TMEM134Q9H6X4 195 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 CERS4Q9HA82 394 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 PARVGQ9HBI0 331 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 ARHGAP28Q9P2N2 729 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 MYH15Q9Y2K3 1946 aa23.05■■□□□ 1.28
SEC13-207ENST00000397105 TBKBP1A7MCY6 615 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 SLC16A4O15374 487 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 FGFR1P11362 822 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 CMA1P23946 247 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 UBXN11Q5T124 520 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 CNNM3Q8NE01 707 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 ARNTL2Q8WYA1 636 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 DHX58Q96C10 678 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 GUCD1Q96NT3 240 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 SAMD11Q96NU1 681 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 CDX2Q99626 313 aaPredicted RBP23.04■■□□□ 1.28
SEC13-207ENST00000397105 PYM1Q9BRP8 204 aaKnown RBP23.04■■□□□ 1.28
SEC13-207ENST00000397105 TRIM6Q9C030 488 aaPredicted RBP23.04■■□□□ 1.28
SEC13-207ENST00000397105 LRRC27Q9C0I9 530 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 TMEM117Q9H0C3 514 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 ZHX3Q9H4I2 956 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 CNTNAP2Q9UHC6 1331 aa23.04■■□□□ 1.28
SEC13-207ENST00000397105 CDH23Q9H251 3354 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 H0YCG3 227 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 POLR2DO15514 142 aaKnown RBP23.03■■□□□ 1.28
SEC13-207ENST00000397105 ATF7P17544 494 aaPredicted RBP23.03■■□□□ 1.28
SEC13-207ENST00000397105 SCP2P22307 547 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 GATMP50440 423 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 ZNF131P52739 623 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 E2F4Q16254 413 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 PAN2Q504Q3 1202 aaKnown RBP23.03■■□□□ 1.28
SEC13-207ENST00000397105 SLC27A1Q6PCB7 646 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 MRPL10Q7Z7H8 261 aaKnown RBP23.03■■□□□ 1.28
SEC13-207ENST00000397105 DDX12PQ92771 950 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 PRDM12Q9H4Q4 367 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 MTUS1Q9ULD2 1270 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 KCNH3Q9ULD8 1083 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 RWDD3Q9Y3V2 267 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 PTPRSQ13332 1948 aa23.03■■□□□ 1.28
SEC13-207ENST00000397105 MYMKA6NI61 221 aa23.02■■□□□ 1.28
SEC13-207ENST00000397105 AMPD3Q01432 767 aa23.02■■□□□ 1.28
SEC13-207ENST00000397105 STRN3Q13033 797 aa23.02■■□□□ 1.28
SEC13-207ENST00000397105 DYMQ7RTS9 669 aa23.02■■□□□ 1.28
SEC13-207ENST00000397105 HACE1Q8IYU2 909 aa23.02■■□□□ 1.28
SEC13-207ENST00000397105 TMEM161BQ8NDZ6 487 aa23.02■■□□□ 1.28
SEC13-207ENST00000397105 RSPH1Q8WYR4 309 aa23.02■■□□□ 1.28
SEC13-207ENST00000397105 CLP1Q92989 425 aaKnown RBP23.02■■□□□ 1.28
SEC13-207ENST00000397105 C17orf80Q9BSJ5 609 aa23.02■■□□□ 1.28
SEC13-207ENST00000397105 EIF2AQ9BY44 585 aaKnown RBP23.02■■□□□ 1.28
SEC13-207ENST00000397105 N4BP3O15049 544 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 LONRF3Q496Y0 759 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 GLB1LQ6UWU2 654 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 SPRED2Q7Z698 418 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 TMEM192Q8IY95 271 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 LPPQ93052 612 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 CASD1Q96PB1 797 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 TNMDQ9H2S6 317 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 UBN1Q9NPG3 1134 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 RNF19AQ9NV58 838 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 KBTBD4Q9NVX7 518 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 IPPQ9Y573 584 aa23.01■■□□□ 1.27
SEC13-207ENST00000397105 MRPL42Q9Y6G3 142 aaKnown RBP23.01■■□□□ 1.27
SEC13-207ENST00000397105 COL4A6Q14031 1691 aa23■■□□□ 1.27
SEC13-207ENST00000397105 TTLL13PA6NNM8 815 aa23■■□□□ 1.27
SEC13-207ENST00000397105 TRAK2O60296 914 aa23■■□□□ 1.27
SEC13-207ENST00000397105 MAPTP10636 758 aaKnown RBP23■■□□□ 1.27
SEC13-207ENST00000397105 NCKAP1LP55160 1127 aa23■■□□□ 1.27
SEC13-207ENST00000397105 EPC2Q52LR7 807 aa23■■□□□ 1.27
SEC13-207ENST00000397105 CLLU1OSQ5K130 101 aa23■■□□□ 1.27
SEC13-207ENST00000397105 NT5DC1Q5TFE4 455 aa23■■□□□ 1.27
SEC13-207ENST00000397105 CDR2LQ86X02 465 aaPredicted RBP23■■□□□ 1.27
SEC13-207ENST00000397105 SMG8Q8ND04 991 aaKnown RBP23■■□□□ 1.27
SEC13-207ENST00000397105 HELQQ8TDG4 1101 aa23■■□□□ 1.27
SEC13-207ENST00000397105 MYLIPQ8WY64 445 aa23■■□□□ 1.27
SEC13-207ENST00000397105 GAS2L1Q99501 681 aaPredicted RBP23■■□□□ 1.27
SEC13-207ENST00000397105 ADPGKQ9BRR6 497 aa23■■□□□ 1.27
SEC13-207ENST00000397105 MRPL4Q9BYD3 311 aaKnown RBP23■■□□□ 1.27
SEC13-207ENST00000397105 PDZD7Q9H5P4 517 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms