RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 STIM1Q13586 685 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 CAPSQ13938 189 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 SPATA1Q5VX52 437 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 STXBP4Q6ZWJ1 553 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 KIAA0319LQ8IZA0 1049 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 MYOCDQ8IZQ8 938 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 TMEM161BQ8NDZ6 487 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 BAG1Q99933 345 aaPredicted RBP16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 SRRTQ9BXP5 876 aaKnown RBP16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 KMT5AQ9NQR1 393 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 ARHGAP28Q9P2N2 729 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 PPP2R2CQ9Y2T4 447 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 ADGRA3Q8IWK6 1321 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 H0YCG3 227 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 KIF20AO95235 890 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 MYBP10242 640 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 CDK11BP21127 795 aaKnown RBP16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 ABCD1P33897 745 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 ZNF200P98182 395 aaPredicted RBP16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 GTF2BQ00403 316 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 GOLGA8FQ08AF8 430 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 GOLGA8DPQ0D2H9 430 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 FAM47CQ5HY64 1035 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 TAF2Q6P1X5 1199 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 TC2NQ8N9U0 490 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 ANKLE1Q8NAG6 615 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 ZNF507Q8TCN5 953 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 VTI1AQ96AJ9 217 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 DHTKD1Q96HY7 919 aaPredicted RBP16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 RWDD2AQ9UIY3 292 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 PCDHB13Q9Y5F0 798 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 CCDC169A6NNP5 214 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 TFRCP02786 760 aaKnown RBP16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 POU5F1BQ06416 359 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 GABPB1Q06547 395 aaPredicted RBP16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 CDCA2Q69YH5 1023 aaPredicted RBP16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 RUFY4Q6ZNE9 571 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 HAUS6Q7Z4H7 955 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 RHPN2Q8IUC4 686 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 HVCN1Q96D96 273 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 CTNND2Q9UQB3 1225 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 MAPK8IP1Q9UQF2 711 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 AKT3Q9Y243 479 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 A0A1B0GTH6 734 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 PSMA7O14818 248 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 SLC16A4O15374 487 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 RPLP2P05387 115 aaKnown RBP16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 CDC42EP1Q00587 391 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 PAK1Q13153 545 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 TFDP1Q14186 410 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 NR1I3Q14994 352 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 PTPN21Q16825 1174 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 ERCC6LQ2NKX8 1250 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 SERINC5Q86VE9 423 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 KSR1Q8IVT5 923 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 LRRN4CLQ8ND94 238 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 CTAGE1Q96RT6 745 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 KIFC3Q9BVG8 833 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 NFKBIZQ9BYH8 718 aa16.25■□□□□ 0.19
TM9SF1-202ENST00000396854 DNAH12Q6ZR08 3092 aa16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 LRRIQ4A6NIV6 560 aa16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 ARVCFO00192 962 aa16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 FANCGO15287 622 aa16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 PRPF6O94906 941 aaKnown RBP16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 ZC2HC1CQ53FD0 456 aaPredicted RBP16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 HSP90AA4PQ58FG1 418 aa16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 KLHL10Q6JEL2 608 aa16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 FOXR2Q6PJQ5 311 aa16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 IFNLR1Q8IU57 520 aaPredicted RBP16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 KRT222Q8N1A0 295 aa16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 NME8Q8N427 588 aa16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 DEPTORQ8TB45 409 aa16.24■□□□□ 0.19
TM9SF1-202ENST00000396854 VTNP04004 478 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 CCNE1P24864 410 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 HOXD13P35453 343 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 CDK7P50613 346 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 GPC3P51654 580 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 CDKAL1Q5VV42 579 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 CENPPQ6IPU0 288 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 RPAINQ86UA6 219 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 ZNF410Q86VK4 478 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 RNF149Q8NC42 400 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 NELFBQ8WX92 580 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 C2orf40Q9H1Z8 148 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 KCTD10Q9H3F6 313 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 TMEM134Q9H6X4 195 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 SAMSN1Q9NSI8 373 aaKnown RBP16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 ZMYM2Q9UBW7 1377 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 DENND3A2RUS2 1198 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 COL6A1P12109 1028 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 PTENP60484 403 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 PTGISQ16647 500 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 KNOP1Q1ED39 458 aaKnown RBP16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 APTXQ7Z2E3 356 aaKnown RBP16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 DNAJB3Q8WWF6 145 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 P2RX5Q93086 422 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 NLRP4Q96MN2 994 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 TMEM106CQ9BVX2 250 aa16.23■□□□□ 0.19
TM9SF1-202ENST00000396854 FAM49AQ9H0Q0 323 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms