RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 A0A087WZ62 844 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 IGKV6-21A0A0C4DH24 114 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 SPTLC1O15269 473 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 ADH1AP07327 375 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 CIITAP33076 1130 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 PRKCEQ02156 737 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 HTR4Q13639 388 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 ELMSAN1Q6PJG2 1045 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 MRPL10Q7Z7H8 261 aaKnown RBP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 ZNF410Q86VK4 478 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 RNF168Q8IYW5 571 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 URGCPQ8TCY9 931 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 SMG7Q92540 1137 aaKnown RBP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 FDXACB1Q9BRP7 624 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 FOXQ1Q9C009 403 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 DISC1Q9NRI5 854 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 FBXO4Q9UKT5 387 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 SAMM50Q9Y512 469 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 DOCK6Q96HP0 2047 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 NRP1O14786 923 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 TEX28O15482 410 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 ABCB7O75027 752 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 RFPL2O75678 378 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 GLUD1P00367 558 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 URODP06132 367 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 UGCGQ16739 394 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 KIAA0319Q5VV43 1072 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 APOA5Q6Q788 366 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 SYNE3Q6ZMZ3 975 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 TAS1R1Q7RTX1 841 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 LENG9Q96B70 501 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 SHDQ96IW2 340 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 DDX23Q9BUQ8 820 aaKnown RBP9.5□□□□□ -0.89
SCFD1-202ENST00000396629 NIFKQ9BYG3 293 aaKnown RBP9.5□□□□□ -0.89
SCFD1-202ENST00000396629 LRRC2Q9BYS8 371 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 MARCH5Q9NX47 278 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 KANSL3Q9P2N6 904 aa9.5□□□□□ -0.89
SCFD1-202ENST00000396629 PIN4Q9Y237 131 aaKnown RBP9.5□□□□□ -0.89
SCFD1-202ENST00000396629 ESYT2A0FGR8 921 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 PRR5-ARHGAP8B1AHC4 643 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 C2CD2LO14523 706 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 SLC27A2O14975 620 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 ADAMTS3O15072 1205 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 LRRN2O75325 713 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 STBD1O95210 358 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 AK2P54819 239 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 ARHGAP8P85298 464 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 EXOC6Q8TAG9 804 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 NT5C3AQ9H0P0 336 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 PLEKHA4Q9H4M7 779 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 ZDHHC7Q9NXF8 308 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 NCDNQ9UBB6 729 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 PCDHB2Q9Y5E7 798 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 CNTNAP2Q9UHC6 1331 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 TPRP12270 2363 aaKnown RBP9.49□□□□□ -0.89
SCFD1-202ENST00000396629 COL4A3Q01955 1670 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 SFNP31947 248 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 DNM2P50570 870 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 AFF1P51825 1210 aaKnown RBP9.49□□□□□ -0.89
SCFD1-202ENST00000396629 DSG1Q02413 1049 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 RTN1Q16799 776 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 PRR16Q569H4 304 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 CATSPER4Q7RTX7 472 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 ZBTB44Q8NCP5 570 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 NELL1Q92832 810 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 FAM193BQ96PV7 902 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-202ENST00000396629 RTKNQ9BST9 563 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 OSBPL6Q9BZF3 934 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 LSG1Q9H089 658 aaKnown RBP9.49□□□□□ -0.89
SCFD1-202ENST00000396629 ZMYND12Q9H0C1 365 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 RSAD1Q9HA92 442 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 AGPAT5Q9NUQ2 364 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 PCDHGA2Q9Y5H1 932 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 ZFP37Q9Y6Q3 630 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-202ENST00000396629 NUMBLQ9Y6R0 609 aa9.49□□□□□ -0.89
SCFD1-202ENST00000396629 KANSL1LA0AUZ9 987 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 LAMTOR5O43504 91 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 EDIL3O43854 480 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 LILRB5O75023 590 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 TGM1P22735 817 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 MAGEA9P43362 315 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 GLUD2P49448 558 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 JAK3P52333 1124 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 GPC5P78333 572 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 NECTIN1Q15223 517 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 MTERF2Q49AM1 385 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 LILRA6Q6PI73 481 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 COLGALT2Q8IYK4 626 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 GPR65Q8IYL9 337 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 RIT2Q99578 217 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 BCO2Q9BYV7 579 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 PRKD2Q9BZL6 878 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 PIDD1Q9HB75 910 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 FAM217BQ9NTX9 383 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 SPATA6Q9NWH7 488 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 SUCLA2Q9P2R7 463 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 ACACBO00763 2458 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 MSH4O15457 936 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 GAS2O43903 313 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms