RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 CTNNA1P35221 906 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 MYBPC2Q14324 1141 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 ANGEL2Q5VTE6 544 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 SEPT14Q6ZU15 432 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 SCYL3Q8IZE3 742 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 CAPS2Q9BXY5 557 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 RAB17Q9H0T7 212 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 SIX2Q9NPC8 291 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 C1orf112Q9NSG2 853 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 ANKEF1Q9NU02 776 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 SUCLA2Q9P2R7 463 aaPredicted RBP12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 MTUS1Q9ULD2 1270 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 ZMYM2Q9UBW7 1377 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 ZSCAN5CA6NGD5 496 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 LRRIQ4A6NIV6 560 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 BUB1BO60566 1050 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 MAPTP10636 758 aaKnown RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 GPC5P78333 572 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 MRPS9P82933 396 aaKnown RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 TTLL12Q14166 644 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 CLUL1Q15846 466 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 NFIL3Q16649 462 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 TTC19Q6DKK2 380 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 THAP2Q9H0W7 228 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 BTNL10A8MVZ5 291 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 H0YCG3 227 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 SART1O43290 800 aaKnown RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 HPDP32754 393 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 ATP1A2P50993 1020 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 ZNF211Q13398 564 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 MCPH1Q8NEM0 835 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 ZNF653Q96CK0 615 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 UBXN6Q9BZV1 441 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 TAF1DQ9H5J8 278 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 ACAD9Q9H845 621 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 ATP6V0A4Q9HBG4 840 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 JPH1Q9HDC5 661 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 AMACRQ9UHK6 382 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 TBX20Q9UMR3 447 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 ZNF536O15090 1300 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 A0A0A6YYK5 440 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 P4HA2O15460 535 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 CYP26A1O43174 497 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 ATP9AO75110 1047 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 JAM2P57087 298 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 GNGT1P63211 74 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 CUL1Q13616 776 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 SAMD3Q8N6K7 520 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 LNX1Q8TBB1 728 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 FAM212AQ96EL1 285 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 FAM213AQ9BRX8 229 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 SLC9A2Q9UBY0 812 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 KCNG1Q9UIX4 513 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
PDXDC1-202ENST00000396410 MYZAPP0CAP1 466 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 CNGA1P29973 690 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 CBWD2Q8IUF1 395 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 NRXN2Q9P2S2 1712 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 AARSP49588 968 aaKnown RBP eCLIP12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 NNTQ13423 1086 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 PPP2R5EQ16537 467 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 UGCGQ16739 394 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 SLC9A9Q8IVB4 645 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 CASKIN2Q8WXE0 1202 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 HOXC10Q9NYD6 342 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 SYF2O95926 243 aaKnown RBP12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 NPTX2P47972 431 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 PHLDB3Q6NSJ2 640 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 APOBEC3FQ8IUX4 373 aaKnown RBP12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 SLC20A1Q8WUM9 679 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 GPRASP2Q96D09 838 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 IMPG2Q9BZV3 1241 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 ANKFY1Q9P2R3 1169 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 DIS3Q9Y2L1 958 aaKnown RBP12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 SOX10P56693 466 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 SNRPFP62306 86 aaKnown RBP12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 PPARDQ03181 441 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 PPP3CAQ08209 521 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 MTMR3Q13615 1198 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 ARHGEF19Q8IW93 802 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 ACTRT1Q8TDG2 376 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 TEX13BQ9BXU2 312 aa12.47□□□□□ -0.41
PDXDC1-202ENST00000396410 ZNF233A6NK53 670 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 XRRA1Q6P2D8 792 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 DAW1Q8N136 415 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 FBXL13Q8NEE6 735 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 SLC7A3Q8WY07 619 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 POLR3FQ9H1D9 316 aaPredicted RBP12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 MYH10P35580 1976 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 EP400Q96L91 3159 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 MAFGO15525 162 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 ZNF572Q7Z3I7 529 aaPredicted RBP12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 CALR3Q96L12 384 aaKnown RBP12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 RNPC3Q96LT9 517 aaKnown RBP12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 FAM114A2Q9NRY5 505 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 DMAC2Q9NW81 257 aa12.46□□□□□ -0.41
PDXDC1-202ENST00000396410 DGAT1O75907 488 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 EGFRP00533 1210 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 DR1Q01658 176 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms