RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 CCDC51Q96ER9 411 aa23.43■■□□□ 1.34
FXN-202ENST00000396364 CLSTN2Q9H4D0 955 aa23.43■■□□□ 1.34
FXN-202ENST00000396364 MINDY3Q9H8M7 445 aa23.43■■□□□ 1.34
FXN-202ENST00000396364 AGPAT5Q9NUQ2 364 aa23.43■■□□□ 1.34
FXN-202ENST00000396364 PIN4Q9Y237 131 aaKnown RBP23.43■■□□□ 1.34
FXN-202ENST00000396364 ADGRA3Q8IWK6 1321 aa23.42■■□□□ 1.34
FXN-202ENST00000396364 CSDE1O75534 798 aaKnown RBP23.42■■□□□ 1.34
FXN-202ENST00000396364 NMT1P30419 496 aaKnown RBP23.42■■□□□ 1.34
FXN-202ENST00000396364 GTF2BQ00403 316 aa23.42■■□□□ 1.34
FXN-202ENST00000396364 GPNMBQ14956 572 aa23.42■■□□□ 1.34
FXN-202ENST00000396364 SKOR2Q2VWA4 1001 aaPredicted RBP23.42■■□□□ 1.34
FXN-202ENST00000396364 BICD1Q96G01 975 aa23.42■■□□□ 1.34
FXN-202ENST00000396364 ADPGKQ9BRR6 497 aa23.42■■□□□ 1.34
FXN-202ENST00000396364 UBE2OQ9C0C9 1292 aaKnown RBP23.42■■□□□ 1.34
FXN-202ENST00000396364 CCDC113Q9H0I3 377 aa23.42■■□□□ 1.34
FXN-202ENST00000396364 C1orf112Q9NSG2 853 aa23.42■■□□□ 1.34
FXN-202ENST00000396364 TBC1D7Q9P0N9 293 aa23.42■■□□□ 1.34
FXN-202ENST00000396364 UBE4BO95155 1302 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 CNTNAP2Q9UHC6 1331 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 EIF3DO15371 548 aaKnown RBP eCLIP23.41■■□□□ 1.34
FXN-202ENST00000396364 TSPAN1O60635 241 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 RHOBTB3O94955 611 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 ACRP10323 421 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 SKIP12755 728 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 KCNJ6P48051 423 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 GPT2Q8TD30 523 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 ACCSQ96QU6 501 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 TMEM206Q9H813 350 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 TBX20Q9UMR3 447 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 PCDHA5Q9Y5H7 936 aa23.41■■□□□ 1.34
FXN-202ENST00000396364 N4BP3O15049 544 aa23.4■■□□□ 1.34
FXN-202ENST00000396364 KLRC4O43908 158 aa23.4■■□□□ 1.34
FXN-202ENST00000396364 FGFR4P22455 802 aa23.4■■□□□ 1.34
FXN-202ENST00000396364 EHHADHQ08426 723 aa23.4■■□□□ 1.34
FXN-202ENST00000396364 CAMK4Q16566 473 aa23.4■■□□□ 1.34
FXN-202ENST00000396364 TWF2Q6IBS0 349 aaKnown RBP23.4■■□□□ 1.34
FXN-202ENST00000396364 ZPBP2Q6X784 338 aa23.4■■□□□ 1.34
FXN-202ENST00000396364 ZNF365Q70YC5 407 aa23.4■■□□□ 1.34
FXN-202ENST00000396364 SYCP3Q8IZU3 236 aa23.4■■□□□ 1.34
FXN-202ENST00000396364 FIZ1Q96SL8 496 aa23.4■■□□□ 1.34
FXN-202ENST00000396364 RAB27AP51159 221 aa23.39■■□□□ 1.33
FXN-202ENST00000396364 L1TD1Q5T7N2 865 aaKnown RBP23.39■■□□□ 1.33
FXN-202ENST00000396364 MAP4K3Q8IVH8 894 aa23.39■■□□□ 1.33
FXN-202ENST00000396364 HACE1Q8IYU2 909 aa23.39■■□□□ 1.33
FXN-202ENST00000396364 SPATA20Q8TB22 786 aa23.39■■□□□ 1.33
FXN-202ENST00000396364 TRIM6Q9C030 488 aaPredicted RBP23.39■■□□□ 1.33
FXN-202ENST00000396364 SLC39A2Q9NP94 309 aa23.39■■□□□ 1.33
FXN-202ENST00000396364 ZBBXA8MT70 800 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 HNRNPDLO14979 420 aaKnown RBP23.38■■□□□ 1.33
FXN-202ENST00000396364 AMHP03971 560 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 ARF4P18085 180 aaPredicted RBP23.38■■□□□ 1.33
FXN-202ENST00000396364 BMP8BP34820 402 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 PPP1R2P41236 205 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 LIG4P49917 911 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 TMEM240Q5SV17 173 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 ATF7IP2Q5U623 682 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 SLC27A1Q6PCB7 646 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 OTOP2Q7RTS6 562 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 TRIML1Q8N9V2 468 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 ADAM2Q99965 735 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 GDF15Q99988 308 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.38■■□□□ 1.339e-6■■■■■ 27.7
FXN-202ENST00000396364 TSPYL2Q9H2G4 693 aaPredicted RBP23.38■■□□□ 1.33
FXN-202ENST00000396364 RGS18Q9NS28 235 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 KIAA1468Q9P260 1216 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 PDE4DIPQ5VU43 2346 aa23.38■■□□□ 1.33
FXN-202ENST00000396364 MICAL3Q7RTP6 2002 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 A0A1B0GUA9 196 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 PPP1R37O75864 691 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 STIM1Q13586 685 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 AMHR2Q16671 573 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 KLHL40Q2TBA0 621 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 ZC2HC1CQ53FD0 456 aaPredicted RBP23.37■■□□□ 1.33
FXN-202ENST00000396364 CCDC183Q5T5S1 534 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 NT5DC1Q5TFE4 455 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 ZNF658Q5TYW1 1059 aaPredicted RBP23.37■■□□□ 1.33
FXN-202ENST00000396364 SLC24A5Q71RS6 500 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 TET1Q8NFU7 2136 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 HERVK_113Q902F9 699 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 TCHPQ9BT92 498 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 TRAIPQ9BWF2 469 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 OSBPL7Q9BZF2 842 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 TMX1Q9H3N1 280 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 TNFSF13BQ9Y275 285 aa23.37■■□□□ 1.33
FXN-202ENST00000396364 TOM1L1O75674 476 aa23.36■■□□□ 1.33
FXN-202ENST00000396364 STAG3L1P0CL83 205 aa23.36■■□□□ 1.33
FXN-202ENST00000396364 MYBP10242 640 aa23.36■■□□□ 1.33
FXN-202ENST00000396364 MATR3P43243 847 aaKnown RBP eCLIP23.36■■□□□ 1.33
FXN-202ENST00000396364 SARSP49591 514 aaKnown RBP23.36■■□□□ 1.33
FXN-202ENST00000396364 DCAF4L1Q3SXM0 396 aa23.36■■□□□ 1.33
FXN-202ENST00000396364 SLFN12LQ6IEE8 588 aa23.36■■□□□ 1.33
FXN-202ENST00000396364 MYOCDQ8IZQ8 938 aa23.36■■□□□ 1.33
FXN-202ENST00000396364 CPB2Q96IY4 423 aa23.36■■□□□ 1.33
FXN-202ENST00000396364 STRA6Q9BX79 667 aa23.36■■□□□ 1.33
FXN-202ENST00000396364 ENPP3O14638 875 aa23.35■■□□□ 1.33
FXN-202ENST00000396364 B4GALT5O43286 388 aa23.35■■□□□ 1.33
FXN-202ENST00000396364 PIGRP01833 764 aa23.35■■□□□ 1.33
FXN-202ENST00000396364 HOXA11P31270 313 aaPredicted RBP23.35■■□□□ 1.33
FXN-202ENST00000396364 SNRPFP62306 86 aaKnown RBP23.35■■□□□ 1.33
FXN-202ENST00000396364 HSP90AA2PQ14568 343 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms