RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 EARS2Q5JPH6 523 aaKnown RBP9.02□□□□□ -0.97
NDE1-202ENST00000396355 SNX30Q5VWJ9 437 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 TMEM214Q6NUQ4 689 aaKnown RBP9.02□□□□□ -0.97
NDE1-202ENST00000396355 KLC3Q6P597 504 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 FAM228AQ86W67 206 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 DIS3L2Q8IYB7 885 aaKnown RBP9.02□□□□□ -0.97
NDE1-202ENST00000396355 OGFOD1Q8N543 542 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 GABPB2Q8TAK5 448 aaPredicted RBP9.02□□□□□ -0.97
NDE1-202ENST00000396355 SDR42E1Q8WUS8 393 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 ANKRD27Q96NW4 1050 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 MRPL46Q9H2W6 279 aaKnown RBP9.02□□□□□ -0.97
NDE1-202ENST00000396355 FBXO2Q9UK22 296 aaPredicted RBP9.02□□□□□ -0.97
NDE1-202ENST00000396355 MYH13Q9UKX3 1938 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 SCN7AQ01118 1682 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 CFAP69A5D8W1 941 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 ANKRD33BA6NCL7 494 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 KCNJ18B7U540 433 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 AGPSO00116 658 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 DCTN3O75935 186 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 HAUS5O94927 633 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 RAPGEF1Q13905 1077 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 KCNJ12Q14500 433 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 ANO4Q32M45 955 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 CCDC152Q4G0S7 254 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 TMEM53Q6P2H8 277 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 TMC5Q6UXY8 1006 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 GPC2Q8N158 579 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 SH3GL1Q99961 368 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 DDX47Q9H0S4 455 aaKnown RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 ABHD10Q9NUJ1 306 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 PNMA3Q9UL41 463 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 TARSL2A2RTX5 802 aaKnown RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 GSTA2P09210 222 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 DDX5P17844 614 aaKnown RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 CETN2P41208 172 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 FOXD4Q12950 439 aaPredicted RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 PRKG1Q13976 671 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 CLUL1Q15846 466 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 TCP11X2Q5H9J9 407 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 FYB2Q5VWT5 728 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 ZBTB8BQ8NAP8 495 aaPredicted RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 FERMT2Q96AC1 680 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 OMA1Q96E52 524 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 CCDC51Q96ER9 411 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 DHRS1Q96LJ7 313 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 ARPC5LQ9BPX5 153 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 SMYD3Q9H7B4 428 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 PDP2Q9P2J9 529 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 DBR1Q9UK59 544 aaKnown RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 MAN1B1Q9UKM7 699 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 DUOX1Q9NRD9 1551 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 A0A087X0B3 334 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 CAMTA2O94983 1202 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 VHLP40337 213 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 ZNF157P51786 506 aaPredicted RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 CDR2Q01850 454 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 RNF19BQ6ZMZ0 732 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 YTHDF3Q7Z739 585 aaKnown RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 DDHD1Q8NEL9 900 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 ZNF384Q8TF68 577 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 SCG3Q8WXD2 468 aaKnown RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 CCDC124Q96CT7 223 aaKnown RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 EIF2AQ9BY44 585 aaKnown RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 CNOT10Q9H9A5 744 aaKnown RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 OLFML3Q9NRN5 406 aa9.01□□□□□ -0.97
NDE1-202ENST00000396355 DDX56Q9NY93 547 aaKnown RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 USP15Q9Y4E8 981 aaPredicted RBP9.01□□□□□ -0.97
NDE1-202ENST00000396355 A0A0G2JND7 137 aa9□□□□□ -0.97
NDE1-202ENST00000396355 A6NJR5 290 aa9□□□□□ -0.97
NDE1-202ENST00000396355 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
NDE1-202ENST00000396355 MAGEB3O15480 346 aa9□□□□□ -0.97
NDE1-202ENST00000396355 ACSL3O95573 720 aa9□□□□□ -0.97
NDE1-202ENST00000396355 NAT2P11245 290 aa9□□□□□ -0.97
NDE1-202ENST00000396355 PTDSS1P48651 473 aaKnown RBP9□□□□□ -0.97
NDE1-202ENST00000396355 COPB1P53618 953 aaKnown RBP9□□□□□ -0.97
NDE1-202ENST00000396355 PPIDQ08752 370 aaKnown RBP9□□□□□ -0.97
NDE1-202ENST00000396355 CALCOCO2Q13137 446 aa9□□□□□ -0.97
NDE1-202ENST00000396355 SPRED3Q2MJR0 410 aa9□□□□□ -0.97
NDE1-202ENST00000396355 TBC1D10BQ4KMP7 808 aaPredicted RBP9□□□□□ -0.97
NDE1-202ENST00000396355 C3orf67Q6ZVT6 689 aa9□□□□□ -0.97
NDE1-202ENST00000396355 PPP1R14CQ8TAE6 165 aa9□□□□□ -0.97
NDE1-202ENST00000396355 THAP11Q96EK4 314 aa9□□□□□ -0.97
NDE1-202ENST00000396355 RILPQ96NA2 401 aa9□□□□□ -0.97
NDE1-202ENST00000396355 GLIS2Q9BZE0 524 aaPredicted RBP9□□□□□ -0.97
NDE1-202ENST00000396355 HACD3Q9P035 362 aa9□□□□□ -0.97
NDE1-202ENST00000396355 SLC4A4Q9Y6R1 1079 aa9□□□□□ -0.97
NDE1-202ENST00000396355 DLEC1Q9Y238 1755 aa9□□□□□ -0.97
NDE1-202ENST00000396355 hCG_1642624A0A1W2PR95 340 aa9□□□□□ -0.97
NDE1-202ENST00000396355 DAPK3O43293 454 aa9□□□□□ -0.97
NDE1-202ENST00000396355 SLC5A1P13866 664 aa9□□□□□ -0.97
NDE1-202ENST00000396355 CPA2P48052 419 aa9□□□□□ -0.97
NDE1-202ENST00000396355 NAA20P61599 178 aa9□□□□□ -0.97
NDE1-202ENST00000396355 SSRP1Q08945 709 aaKnown RBP9□□□□□ -0.97
NDE1-202ENST00000396355 PPP2R5CQ13362 524 aa9□□□□□ -0.97
NDE1-202ENST00000396355 MED21Q13503 144 aa9□□□□□ -0.97
NDE1-202ENST00000396355 SPATA1Q5VX52 437 aa9□□□□□ -0.97
NDE1-202ENST00000396355 MFSD6Q6ZSS7 791 aa9□□□□□ -0.97
NDE1-202ENST00000396355 ARHGAP24Q8N264 748 aa9□□□□□ -0.97
NDE1-202ENST00000396355 HPS3Q969F9 1004 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms