RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 EFCAB13Q8IY85 973 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 PCSK9Q8NBP7 692 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 SYTL5Q8TDW5 730 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 PDCD2LQ9BRP1 358 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NTPCRQ9BSD7 190 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 GCOM2Q9BZD3 368 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 TRPV6Q9H1D0 765 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ECM29Q5VYK3 1845 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 TRIP11Q15643 1979 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 CAPN9O14815 690 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 MARSP56192 900 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 TTBK2Q6IQ55 1244 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 USP49Q70CQ1 688 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NLRP7Q8WX94 980 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 HSD17B14Q9BPX1 270 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 AIPL1Q9NZN9 384 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 KCNH4Q9UQ05 1017 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 CHGBP05060 677 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 CLTAP09496 248 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF280AP59817 542 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NBPF9Q3BBW0 867 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 DENND2CQ68D51 928 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 GBP7Q8N8V2 638 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 FAM76AQ8TAV0 307 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF507Q8TCN5 953 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NLRP4Q96MN2 994 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NUDT12Q9BQG2 462 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 SLC45A1Q9Y2W3 748 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NUP214P35658 2090 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 TYW5A2RUC4 315 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 GH1P01241 217 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 HNRNPH3P31942 346 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 TFAMQ00059 246 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 BMT2Q1RMZ1 405 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ARL13BQ3SXY8 428 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ALS2CLQ60I27 953 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 C12orf56Q8IXR9 622 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 FAM212AQ96EL1 285 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ZFYVE28Q9HCC9 887 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 WDR87Q6ZQQ6 2873 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 THSD7AQ9UPZ6 1657 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 POU5F1BQ06416 359 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 SFR1Q86XK3 245 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TBX20Q9UMR3 447 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CROCCQ5TZA2 2017 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TOMM70O94826 608 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 SUPT20HL2P0C7V6 817 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 RGS2P41220 211 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 RARRES1P49788 294 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 NPEPPSP55786 919 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 NOTUMQ6P988 496 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF410Q86VK4 478 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 HNRNPLLQ8WVV9 542 aaKnown RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 GPR101Q96P66 508 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 DNAJC7Q99615 494 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 WNT8AQ9H1J5 351 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TMEM60Q9H2L4 133 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 L2HGDHQ9H9P8 463 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 SENP1Q9P0U3 644 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 KCNK3O14649 394 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 HUS1O60921 280 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 LSM8O95777 96 aaKnown RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CYP2C8P10632 490 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF568Q3ZCX4 644 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 UTP14CQ5TAP6 766 aaKnown RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ANKRD40Q6AI12 368 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 SWSAP1Q6NVH7 229 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TRIM65Q6PJ69 517 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 KIRREL3Q8IZU9 778 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 GBA2Q9HCG7 927 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 AGPAT3Q9NRZ7 376 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 RREB1Q92766 1687 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 WDR81Q562E7 1941 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 MYMKA6NI61 221 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CES2O00748 559 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 LRRN2O75325 713 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF135P52742 658 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 MTERF2Q49AM1 385 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TAX1BP1Q86VP1 789 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 BBS5Q8N3I7 341 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TMC2Q8TDI7 906 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 GLT1D1Q96MS3 346 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ASIC3Q9UHC3 531 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 STAP1Q9ULZ2 295 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ACACAQ13085 2346 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CCL15-CCL14A0A0B4J2E2 113 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 IGKV6D-41A0A0C4DH26 115 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 GYPCP04921 128 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 KRT19P08727 400 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ZFXP17010 805 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 RWDD2BP57060 319 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 NAB2Q15742 525 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TAF12Q16514 161 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CCL15Q16663 113 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 LBX2Q6XYB7 198 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 MAEAQ7L5Y9 396 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 BEST2Q8NFU1 509 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TTC25Q96NG3 672 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 RAVER2Q9HCJ3 691 aaKnown RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 NAGPAQ9UK23 515 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms