RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 TM6SF1Q9BZW5 370 aa7□□□□□ -1.29
PTPN20-208ENST00000395727 NIF3L1Q9GZT8 377 aa7□□□□□ -1.29
PTPN20-208ENST00000395727 SMG9Q9H0W8 520 aaKnown RBP7□□□□□ -1.29
PTPN20-208ENST00000395727 JPH1Q9HDC5 661 aaPredicted RBP7□□□□□ -1.29
PTPN20-208ENST00000395727 YBX2Q9Y2T7 364 aaKnown RBP7□□□□□ -1.29
PTPN20-208ENST00000395727 SNX14Q9Y5W7 946 aa7□□□□□ -1.29
PTPN20-208ENST00000395727 NFASCO94856 1347 aa7□□□□□ -1.29
PTPN20-208ENST00000395727 NRCAMQ92823 1304 aa7□□□□□ -1.29
PTPN20-208ENST00000395727 MYH7BA7E2Y1 1941 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 KLF18A0A0U1RQI7 1052 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 ABHD14A-ACY1A0A1B0GW23 586 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 C17orf102A2RUQ5 167 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 GOLGA8AA7E2F4 631 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 GOLGA8BA8MQT2 603 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 GRXCR1A8MXD5 290 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 STXBP3O00186 592 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 GNB5O14775 395 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 NBNO60934 754 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 GHRHP01286 108 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 NEFLP07196 543 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 CYP3A4P08684 503 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 SMIM10L2AP0DMW4 78 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 SMIM10L2BP0DMW5 78 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 RPS6KB1P23443 525 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 PSMA5P28066 241 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 CDC27P30260 824 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 TCF7P36402 384 aaPredicted RBP6.99□□□□□ -1.29
PTPN20-208ENST00000395727 SREBF1P36956 1147 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 NAPAP54920 295 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 WDR5P61964 334 aaKnown RBP6.99□□□□□ -1.29
PTPN20-208ENST00000395727 MTMR1Q13613 665 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 PFKFB3Q16875 520 aaPredicted RBP6.99□□□□□ -1.29
PTPN20-208ENST00000395727 TAF2Q6P1X5 1199 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 BLOC1S2Q6QNY1 142 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 CYFIP1Q7L576 1253 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 HEATR3Q7Z4Q2 680 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 SKAP1Q86WV1 359 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 HERC6Q8IVU3 1022 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 CCDC12Q8WUD4 166 aaPredicted RBP6.99□□□□□ -1.29
PTPN20-208ENST00000395727 PIBF1Q8WXW3 757 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 TRIM11Q96F44 468 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 RNF26Q9BY78 433 aaPredicted RBP6.99□□□□□ -1.29
PTPN20-208ENST00000395727 ZMYND12Q9H0C1 365 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 RNPEPQ9H4A4 650 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 SLC28A3Q9HAS3 691 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 JADE2Q9NQC1 790 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 PCDHA6Q9UN73 950 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 PCDHA8Q9Y5H6 950 aa6.99□□□□□ -1.29
PTPN20-208ENST00000395727 BAZ2BQ9UIF8 2168 aaKnown RBP6.99□□□□□ -1.29
PTPN20-208ENST00000395727 DOCK5Q9H7D0 1870 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 COL4A4P53420 1690 aaPredicted RBP6.98□□□□□ -1.29
PTPN20-208ENST00000395727 IGKV6D-21A0A0A0MT36 114 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 MBLAC1A4D2B0 266 aaPredicted RBP6.98□□□□□ -1.29
PTPN20-208ENST00000395727 MEIS1O00470 390 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 PRPF3O43395 683 aaKnown RBP6.98□□□□□ -1.29
PTPN20-208ENST00000395727 ATP9AO75110 1047 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 SCG2P13521 617 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 IFNAR1P17181 557 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 SLC26A2P50443 739 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 METAP2P50579 478 aaKnown RBP eCLIP6.98□□□□□ -1.29
PTPN20-208ENST00000395727 ADCY7P51828 1080 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 ATP11AP98196 1134 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 MBTPS1Q14703 1052 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 NTRK3Q16288 839 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 UBE2SQ16763 222 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 CEP55Q53EZ4 464 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 PLEKHG4Q58EX7 1191 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 ZNF618Q5T7W0 954 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 PEAR1Q5VY43 1037 aaPredicted RBP6.98□□□□□ -1.29
PTPN20-208ENST00000395727 DEFB128Q7Z7B8 93 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 LMBR1Q8WVP7 490 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 SEPT1Q8WYJ6 367 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 APBB2Q92870 758 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 TNPO1Q92973 898 aaKnown RBP6.98□□□□□ -1.29
PTPN20-208ENST00000395727 ATP6V0A1Q93050 837 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 WNT8BQ93098 351 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 IL17RAQ96F46 866 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 SPACA7Q96KW9 195 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 MXRA8Q9BRK3 442 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 ALG1Q9BT22 464 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 ANO3Q9BYT9 981 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 RBSNQ9H1K0 784 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 DNAJC25Q9H1X3 360 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 NKX2-4Q9H2Z4 354 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 BCAS3Q9H6U6 928 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 KCNH7Q9NS40 1196 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 ERAP1Q9NZ08 941 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 RTEL1Q9NZ71 1219 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 SIP14410 1827 aa6.98□□□□□ -1.29
PTPN20-208ENST00000395727 IGLV3-22A0A075B6J6 115 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 GSTTP1A0A1W2PQM5 241 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 SMCO2A6NFE2 343 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 RSPH10B2B2RC85 870 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 KIF28PB7ZC32 967 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 PIK3R2O00459 728 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 EIF1AYO14602 144 aaKnown RBP6.97□□□□□ -1.29
PTPN20-208ENST00000395727 CPNE3O75131 537 aaKnown RBP6.97□□□□□ -1.29
PTPN20-208ENST00000395727 GJB5O95377 273 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 RSPH10BP0C881 870 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 EDN3P14138 238 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms