RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 NPEPPSP55786 919 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 ZC2HC1CQ53FD0 456 aaPredicted RBP21.1■□□□□ 0.97
LMNB1-202ENST00000395354 PLA2G4FQ68DD2 849 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 SLC9A9Q8IVB4 645 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 C7orf31Q8N865 590 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 MCPH1Q8NEM0 835 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 PPP1R13LQ8WUF5 828 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 KIFAP3Q92845 792 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 CEP170P1Q96L14 293 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 PRIMPOLQ96LW4 560 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 C16orf45Q96MC5 204 aaPredicted RBP21.1■□□□□ 0.97
LMNB1-202ENST00000395354 PCMTD1Q96MG8 357 aaPredicted RBP21.1■□□□□ 0.97
LMNB1-202ENST00000395354 ARMCX3Q9UH62 379 aaPredicted RBP21.1■□□□□ 0.97
LMNB1-202ENST00000395354 SCN10AQ9Y5Y9 1956 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 K7ENM7 598 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 RNF225M0QZC1 329 aaPredicted RBP21.1■□□□□ 0.97
LMNB1-202ENST00000395354 DGAT1O75907 488 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 EPB41P11171 864 aaKnown RBP21.1■□□□□ 0.97
LMNB1-202ENST00000395354 RTP1P59025 263 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 KCNA1Q09470 495 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 HVCN1Q96D96 273 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 STARD7Q9NQZ5 370 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 PDLIM7Q9NR12 457 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 CYP26B1Q9NR63 512 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 KCNG1Q9UIX4 513 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 PPP2R2CQ9Y2T4 447 aa21.1■□□□□ 0.97
LMNB1-202ENST00000395354 BRCA2P51587 3418 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 SMIM10L2AP0DMW4 78 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 SMIM10L2BP0DMW5 78 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 NCKAP1LP55160 1127 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 GTF2BQ00403 316 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 PPFIA1Q13136 1202 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 ITGA7Q13683 1181 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 TARBP2Q15633 366 aaKnown RBP21.09■□□□□ 0.97
LMNB1-202ENST00000395354 MTERF2Q49AM1 385 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 ZNF484Q5JVG2 852 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 ABHD8Q96I13 439 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 ACCSQ96QU6 501 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 SENP6Q9GZR1 1112 aaPredicted RBP21.09■□□□□ 0.97
LMNB1-202ENST00000395354 SETD4Q9NVD3 440 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 DMAC2Q9NW81 257 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 HDAC6Q9UBN7 1215 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 GRIN2DO15399 1336 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 KAT6AQ92794 2004 aa21.09■□□□□ 0.97
LMNB1-202ENST00000395354 MYH11P35749 1972 aa21.08■□□□□ 0.97
LMNB1-202ENST00000395354 ABCD1P33897 745 aa21.08■□□□□ 0.97
LMNB1-202ENST00000395354 PSMC2P35998 433 aaKnown RBP21.08■□□□□ 0.97
LMNB1-202ENST00000395354 SMTNP53814 917 aa21.08■□□□□ 0.97
LMNB1-202ENST00000395354 MEA1Q16626 185 aa21.08■□□□□ 0.97
LMNB1-202ENST00000395354 REXO1L1PQ8IX06 675 aa21.08■□□□□ 0.97
LMNB1-202ENST00000395354 C12orf56Q8IXR9 622 aa21.08■□□□□ 0.97
LMNB1-202ENST00000395354 SPIRE2Q8WWL2 714 aa21.08■□□□□ 0.97
LMNB1-202ENST00000395354 NTPCRQ9BSD7 190 aaKnown RBP21.08■□□□□ 0.97
LMNB1-202ENST00000395354 AGPAT3Q9NRZ7 376 aa21.08■□□□□ 0.97
LMNB1-202ENST00000395354 NRCAMQ92823 1304 aa21.08■□□□□ 0.96
LMNB1-202ENST00000395354 RRN3P2A6NIE6 340 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 SOWAHDA6NJG2 315 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 ZBTB42B2RXF5 422 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 AKAP3O75969 853 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 EN2P19622 333 aaPredicted RBP21.07■□□□□ 0.96
LMNB1-202ENST00000395354 IGBP1P78318 339 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 CDK17Q00537 523 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 GRIK4Q16099 956 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 FAM47CQ5HY64 1035 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 FAM102BQ5T8I3 360 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 NFRKBQ6P4R8 1299 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 MAEAQ7L5Y9 396 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 HAUS6Q7Z4H7 955 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 SYCP3Q8IZU3 236 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 DIS3LQ8TF46 1054 aaKnown RBP21.07■□□□□ 0.96
LMNB1-202ENST00000395354 ZNHIT6Q9NWK9 470 aaKnown RBP21.07■□□□□ 0.96
LMNB1-202ENST00000395354 R3HCC1Q9Y3T6 440 aaKnown RBP21.07■□□□□ 0.96
LMNB1-202ENST00000395354 PPME1Q9Y570 386 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 PAXBP1Q9Y5B6 917 aa21.07■□□□□ 0.96
LMNB1-202ENST00000395354 CCDC175P0C221 793 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 SCP2P22307 547 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 HNRNPH3P31942 346 aaKnown RBP21.06■□□□□ 0.96
LMNB1-202ENST00000395354 KLK7P49862 253 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 RAD9BQ6WBX8 426 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 NEK11Q8NG66 645 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 TRAPPC12Q8WVT3 735 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 BORCS6Q96GS4 357 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 PAWRQ96IZ0 340 aaKnown RBP21.06■□□□□ 0.96
LMNB1-202ENST00000395354 CEP89Q96ST8 783 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 MMRN2Q9H8L6 949 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 ATP6V0A4Q9HBG4 840 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 COL1A2P08123 1366 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 A0A0U1RQG5 324 aaPredicted RBP21.06■□□□□ 0.96
LMNB1-202ENST00000395354 C17orf102A2RUQ5 167 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 CLIC2O15247 247 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 AFPP02771 609 aaKnown RBP21.06■□□□□ 0.96
LMNB1-202ENST00000395354 GNAT1P11488 350 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 COL6A1P12109 1028 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 PEX3P56589 373 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 KCNMA1Q12791 1236 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 KCNH2Q12809 1159 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 DMP1Q13316 513 aaPredicted RBP21.06■□□□□ 0.96
LMNB1-202ENST00000395354 ARID2Q68CP9 1835 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 TOGARAM2Q6ZUX3 1019 aa21.06■□□□□ 0.96
LMNB1-202ENST00000395354 LMBR1Q8WVP7 490 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms