RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 USP20Q9Y2K6 914 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 ZNF862O60290 1169 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 TMEM253P0C7T8 217 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 ZBTB48P10074 688 aaPredicted RBP20.17■□□□□ 0.82
SIL1-202ENST00000394817 SLC7A5Q01650 507 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 HSP90B2PQ58FF3 399 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 DPY19L2Q6NUT2 758 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 SYCE1Q8N0S2 351 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 USP38Q8NB14 1042 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 ZSWIM2Q8NEG5 633 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 SPIRE2Q8WWL2 714 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 A1CFQ9NQ94 594 aaKnown RBP20.17■□□□□ 0.82
SIL1-202ENST00000394817 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.17■□□□□ 0.82
SIL1-202ENST00000394817 GABBR1Q9UBS5 961 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 KCNK3O14649 394 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 STBD1O95210 358 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 ADRB2P07550 413 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 EPHX2P34913 555 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 GPR162Q16538 588 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 ARHGAP44Q17R89 818 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 TRMT1LQ7Z2T5 733 aaKnown RBP20.17■□□□□ 0.82
SIL1-202ENST00000394817 RFFLQ8WZ73 363 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 CCDC102AQ96A19 550 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 NTPCRQ9BSD7 190 aaKnown RBP20.17■□□□□ 0.82
SIL1-202ENST00000394817 GOLPH3Q9H4A6 298 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 TMOD4Q9NZQ9 345 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 TMEM59LQ9UK28 342 aa20.17■□□□□ 0.82
SIL1-202ENST00000394817 A0A0U1RQG5 324 aaPredicted RBP20.16■□□□□ 0.82
SIL1-202ENST00000394817 FOXN3O00409 490 aaPredicted RBP20.16■□□□□ 0.82
SIL1-202ENST00000394817 GCLMP48507 274 aa20.16■□□□□ 0.82
SIL1-202ENST00000394817 MXI1P50539 228 aa20.16■□□□□ 0.82
SIL1-202ENST00000394817 EPHB4P54760 987 aa20.16■□□□□ 0.82
SIL1-202ENST00000394817 MOB2Q70IA6 237 aa20.16■□□□□ 0.82
SIL1-202ENST00000394817 ARHGEF19Q8IW93 802 aa20.16■□□□□ 0.82
SIL1-202ENST00000394817 ACTRT1Q8TDG2 376 aa20.16■□□□□ 0.82
SIL1-202ENST00000394817 JPH1Q9HDC5 661 aaPredicted RBP20.16■□□□□ 0.82
SIL1-202ENST00000394817 SUCLA2Q9P2R7 463 aaPredicted RBP20.16■□□□□ 0.82
SIL1-202ENST00000394817 STXBP5LQ9Y2K9 1186 aa20.16■□□□□ 0.82
SIL1-202ENST00000394817 SIP14410 1827 aa20.16■□□□□ 0.82
SIL1-202ENST00000394817 ZNFX1Q9P2E3 1918 aaKnown RBP20.16■□□□□ 0.82
SIL1-202ENST00000394817 CCDC169A6NNP5 214 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 SPDYE16A6NNV3 312 aaPredicted RBP20.15■□□□□ 0.82
SIL1-202ENST00000394817 LRRN2O75325 713 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 PSAPP07602 524 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 ADSSP30520 456 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 PEX26Q7Z412 305 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 EXOC4Q96A65 974 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 CDCA5Q96FF9 252 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 CEP170P1Q96L14 293 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 TMEM117Q9H0C3 514 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 UBE2TQ9NPD8 197 aaPredicted RBP20.15■□□□□ 0.82
SIL1-202ENST00000394817 KMT5AQ9NQR1 393 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 ADAM21Q9UKJ8 722 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 DENND3A2RUS2 1198 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 ANKRD63C9JTQ0 380 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 SNRNP35Q16560 246 aaKnown RBP20.15■□□□□ 0.82
SIL1-202ENST00000394817 GNPTABQ3T906 1256 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 EMBQ6PCB8 327 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 CTNNBL1Q8WYA6 563 aaPredicted RBP20.15■□□□□ 0.82
SIL1-202ENST00000394817 BSNDQ8WZ55 320 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 KIFC3Q9BVG8 833 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 HOXC10Q9NYD6 342 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 PSD3Q9NYI0 1048 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 VPS18Q9P253 973 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 SLC9A2Q9UBY0 812 aa20.15■□□□□ 0.82
SIL1-202ENST00000394817 TNFAIP3P21580 790 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 CNGA1P29973 690 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 RTP1P59025 263 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 MRPS25P82663 173 aaKnown RBP20.14■□□□□ 0.81
SIL1-202ENST00000394817 USP50Q70EL3 339 aaPredicted RBP20.14■□□□□ 0.81
SIL1-202ENST00000394817 NT5DC3Q86UY8 548 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 MCPH1Q8NEM0 835 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 GDAP1L1Q96MZ0 367 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 PDLIM7Q9NR12 457 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 GDF3Q9NR23 364 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 FAN1Q9Y2M0 1017 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 PFASO15067 1338 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 SPATA31C2B4DYI2 1134 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 DGAT1O75907 488 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 TNNC1P63316 161 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 SH3D19Q5HYK7 790 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 TREML2Q5T2D2 321 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 ABHD15Q6UXT9 468 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 DAAM2Q86T65 1068 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 CBWD2Q8IUF1 395 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 CCDC60Q8IWA6 550 aaPredicted RBP20.14■□□□□ 0.81
SIL1-202ENST00000394817 METTL13Q8N6R0 699 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 CAVIN3Q969G5 261 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 CLMNQ96JQ2 1002 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 CALR3Q96L12 384 aaKnown RBP20.14■□□□□ 0.81
SIL1-202ENST00000394817 FBXL18Q96ME1 805 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 AGPAT1Q99943 283 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 HINFPQ9BQA5 517 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 ELP3Q9H9T3 547 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 CSADQ9Y600 493 aa20.14■□□□□ 0.81
SIL1-202ENST00000394817 IGSF9BQ9UPX0 1349 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 ANKRD62A6NC57 917 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 GOLGA8IPA6NC78 632 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 GOLGA8JA6NMD2 632 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 SYF2O95926 243 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms