RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 SLC35G2Q8TBE7 412 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 COL11A1P12107 1806 aaPredicted RBP16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 GOLGA6BA6NDN3 693 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 PHACTR2O75167 634 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 GCLMP48507 274 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 TCEAL1Q15170 157 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 DAAM2Q86T65 1068 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 APOBEC3FQ8IUX4 373 aaKnown RBP16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 EIF1ADQ8N9N8 165 aaKnown RBP16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 CTNNBL1Q8WYA6 563 aaPredicted RBP16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 KIFAP3Q92845 792 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 AGPAT1Q99943 283 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.61■□□□□ 0.255e-7■■■■□ 24.9
UBE2D3-207ENST00000394801 TMEM117Q9H0C3 514 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 EPB41L5Q9HCM4 733 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 NFASCO94856 1347 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 WDR81Q562E7 1941 aa16.61■□□□□ 0.25
UBE2D3-207ENST00000394801 ZNF862O60290 1169 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 CEP104O60308 925 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 CNGA1P29973 690 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 HMGCS2P54868 508 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 HADHBP55084 474 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 TMEM132BQ14DG7 1078 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 ALS2CLQ60I27 953 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 CATSPERGQ6ZRH7 1159 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 ARHGEF19Q8IW93 802 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 PDLIM7Q9NR12 457 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 TTC7AQ9ULT0 858 aaPredicted RBP16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 BCS1LQ9Y276 419 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 COQ4Q9Y3A0 265 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 ANKRD63C9JTQ0 380 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 PGRMC1O00264 195 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 STAM2O75886 525 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 ADRB2P07550 413 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 CARSP49589 748 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 MXI1P50539 228 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 RTP1P59025 263 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 RNASE9P60153 205 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 DMP1Q13316 513 aaPredicted RBP16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 ATP6V0A1Q93050 837 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 KLRG1Q96E93 195 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 CDHR1Q96JP9 859 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 FBXL18Q96ME1 805 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 SH3GL2Q99962 352 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 ISCUQ9H1K1 167 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 FAM204AQ9H8W3 233 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 OSGEPQ9NPF4 335 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 AMFRQ9UKV5 643 aa16.6■□□□□ 0.25
UBE2D3-207ENST00000394801 BHMG1C9JSJ3 638 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 BUB1BO60566 1050 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 LRRN2O75325 713 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 CAPN2P17655 700 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 LMAN1P49257 510 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 GUCY2DQ02846 1103 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 PAK2Q13177 524 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 SNRNP35Q16560 246 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 PALB2Q86YC2 1186 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 ZBTB9Q96C00 473 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 CYP39A1Q9NYL5 469 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 TAS2R14Q9NYV8 317 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 GABBR1Q9UBS5 961 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 DIS3Q9Y2L1 958 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 CCDC169A6NNP5 214 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 TMCO5BA8MYB1 307 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 CCDC188H7C350 402 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 RAD51CO43502 376 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 ENPEPQ07075 957 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 ANGEL2Q5VTE6 544 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 MREGQ8N565 214 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 PARD3BQ8TEW8 1205 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 RIN2Q8WYP3 895 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 CEP170P1Q96L14 293 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 TEX13BQ9BXU2 312 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 KMT5AQ9NQR1 393 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 IGSF9BQ9UPX0 1349 aa16.59■□□□□ 0.25
UBE2D3-207ENST00000394801 KIAA1217Q5T5P2 1943 aa16.58■□□□□ 0.25
UBE2D3-207ENST00000394801 DENND3A2RUS2 1198 aa16.58■□□□□ 0.25
UBE2D3-207ENST00000394801 PSAPP07602 524 aa16.58■□□□□ 0.25
UBE2D3-207ENST00000394801 CBWD2Q8IUF1 395 aa16.58■□□□□ 0.25
UBE2D3-207ENST00000394801 FAM71AQ8IYT1 594 aa16.58■□□□□ 0.25
UBE2D3-207ENST00000394801 TMC2Q8TDI7 906 aa16.58■□□□□ 0.25
UBE2D3-207ENST00000394801 MFSD14AQ96MC6 490 aa16.58■□□□□ 0.25
UBE2D3-207ENST00000394801 NFU1Q9UMS0 254 aa16.58■□□□□ 0.25
UBE2D3-207ENST00000394801 NOC2LQ9Y3T9 749 aaKnown RBP16.58■□□□□ 0.25
UBE2D3-207ENST00000394801 MYPNQ86TC9 1320 aa16.58■□□□□ 0.25
UBE2D3-207ENST00000394801 ZSCAN5CA6NGD5 496 aaPredicted RBP16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 DGAT1O75907 488 aa16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 NOL9Q5SY16 702 aaKnown RBP16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 PRAMEF18Q5VWM3 479 aa16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 KRT39Q6A163 491 aa16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 ABHD15Q6UXT9 468 aa16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 TRMT1LQ7Z2T5 733 aaKnown RBP16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 RHOT2Q8IXI1 618 aa16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 TSEN2Q8NCE0 465 aaKnown RBP16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 MCPH1Q8NEM0 835 aa16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 CASKIN2Q8WXE0 1202 aa16.58■□□□□ 0.24
UBE2D3-207ENST00000394801 BSNDQ8WZ55 320 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms