RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 PACSIN2Q9UNF0 486 aaPredicted RBP22.14■■□□□ 1.13
PRKCD-202ENST00000394729 LAMA2P24043 3122 aaKnown RBP22.13■■□□□ 1.13
PRKCD-202ENST00000394729 MAPTP10636 758 aaKnown RBP22.13■■□□□ 1.13
PRKCD-202ENST00000394729 GTF2F1P35269 517 aaKnown RBP eCLIP22.13■■□□□ 1.13
PRKCD-202ENST00000394729 DRAP1Q14919 205 aaPredicted RBP22.13■■□□□ 1.13
PRKCD-202ENST00000394729 RHPN2Q8IUC4 686 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 PPM1KQ8N3J5 372 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 MCPH1Q8NEM0 835 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 RDM1Q8NG50 284 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 GPR20Q99678 358 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 RNPEPQ9H4A4 650 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 WDR81Q562E7 1941 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 CTIFO43310 598 aaKnown RBP22.13■■□□□ 1.13
PRKCD-202ENST00000394729 ICAM3P32942 547 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 GTF2A2P52657 109 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 WNT7BP56706 349 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 MRPS25P82663 173 aaKnown RBP22.13■■□□□ 1.13
PRKCD-202ENST00000394729 ARHGEF19Q8IW93 802 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 SMARCAL1Q9NZC9 954 aa22.13■■□□□ 1.13
PRKCD-202ENST00000394729 K7ERI5 159 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 TMEM132AQ24JP5 1023 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 SCARA3Q6AZY7 606 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 CCDC170Q8IYT3 715 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 NAPGQ99747 312 aaPredicted RBP22.12■■□□□ 1.13
PRKCD-202ENST00000394729 L2HGDHQ9H9P8 463 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 KIAA0753Q2KHM9 967 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 CELF3Q5SZQ8 465 aaKnown RBP22.12■■□□□ 1.13
PRKCD-202ENST00000394729 TMEM130Q8N3G9 435 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 MROH8Q9H579 483 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 DNAJC25-GNG10A0A024R161 153 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 SERPING1P05155 500 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 VAV2P52735 878 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 RNASE9P60153 205 aaKnown RBP22.12■■□□□ 1.13
PRKCD-202ENST00000394729 TAF3Q5VWG9 929 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 SPRYD7Q5W111 196 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 DPY19L2P1Q6NXN4 242 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 RNF149Q8NC42 400 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 SECISBP2LQ93073 1101 aaKnown RBP22.12■■□□□ 1.13
PRKCD-202ENST00000394729 MRFAP1Q9Y605 127 aa22.12■■□□□ 1.13
PRKCD-202ENST00000394729 DKC1O60832 514 aaKnown RBP eCLIP22.11■■□□□ 1.131e-6■■■■■ 38.2
PRKCD-202ENST00000394729 ABCB4P21439 1286 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 C1orf220Q5T0J3 134 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 FOXR2Q6PJQ5 311 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 MAP4K3Q8IVH8 894 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 GLYCTKQ8IVS8 523 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 AFG1LQ8WV93 481 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 EHD2Q9NZN4 543 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 EVI5O60447 810 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 SSTR3P32745 418 aaPredicted RBP22.11■■□□□ 1.13
PRKCD-202ENST00000394729 MXI1P50539 228 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 NLRP11P59045 1033 aaKnown RBP22.11■■□□□ 1.13
PRKCD-202ENST00000394729 STRN3Q13033 797 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 GOLGA5Q8TBA6 731 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 UBXN4Q92575 508 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 TMEM117Q9H0C3 514 aa22.11■■□□□ 1.13
PRKCD-202ENST00000394729 ZNFX1Q9P2E3 1918 aaKnown RBP22.11■■□□□ 1.13
PRKCD-202ENST00000394729 CAPSQ13938 189 aa22.1■■□□□ 1.13
PRKCD-202ENST00000394729 IRF2BP2Q7Z5L9 587 aa22.1■■□□□ 1.13
PRKCD-202ENST00000394729 GPR142Q7Z601 462 aa22.1■■□□□ 1.13
PRKCD-202ENST00000394729 PLEKHA4Q9H4M7 779 aa22.1■■□□□ 1.13
PRKCD-202ENST00000394729 PDE11AQ9HCR9 933 aa22.1■■□□□ 1.13
PRKCD-202ENST00000394729 NRBP2Q9NSY0 501 aa22.1■■□□□ 1.13
PRKCD-202ENST00000394729 FOXN3O00409 490 aaPredicted RBP22.1■■□□□ 1.13
PRKCD-202ENST00000394729 FAM160B1Q5W0V3 765 aa22.1■■□□□ 1.13
PRKCD-202ENST00000394729 INTS8Q75QN2 995 aaKnown RBP22.1■■□□□ 1.13
PRKCD-202ENST00000394729 SEMA4DQ92854 862 aa22.1■■□□□ 1.13
PRKCD-202ENST00000394729 ERO1AQ96HE7 468 aa22.1■■□□□ 1.13
PRKCD-202ENST00000394729 PDLIM7Q9NR12 457 aa22.1■■□□□ 1.13
PRKCD-202ENST00000394729 ATG7O95352 703 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 FTCDO95954 541 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 TNNI1P19237 187 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 HNRNPH3P31942 346 aaKnown RBP22.09■■□□□ 1.13
PRKCD-202ENST00000394729 CCNA1P78396 465 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 TTLL4Q14679 1199 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 PALB2Q86YC2 1186 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 TAS1R2Q8TE23 839 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 U2AF1L4Q8WU68 220 aaKnown RBP22.09■■□□□ 1.13
PRKCD-202ENST00000394729 DHX38Q92620 1227 aaKnown RBP22.09■■□□□ 1.13
PRKCD-202ENST00000394729 HAPLN2Q9GZV7 340 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 DHX33Q9H6R0 707 aaKnown RBP22.09■■□□□ 1.13
PRKCD-202ENST00000394729 EXOC7Q9UPT5 735 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 KLRC1P26715 233 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 TMEM62Q0P6H9 643 aa22.09■■□□□ 1.13
PRKCD-202ENST00000394729 MPHOSPH6Q99547 160 aaKnown RBP22.09■■□□□ 1.13
PRKCD-202ENST00000394729 UBE4BO95155 1302 aa22.08■■□□□ 1.13
PRKCD-202ENST00000394729 LRRIQ3A6PVS8 624 aaPredicted RBP22.08■■□□□ 1.13
PRKCD-202ENST00000394729 IGF2BP3O00425 579 aaKnown RBP eCLIP22.08■■□□□ 1.13
PRKCD-202ENST00000394729 RHOXF2BP0C7M4 288 aa22.08■■□□□ 1.13
PRKCD-202ENST00000394729 NOP2P46087 812 aaKnown RBP22.08■■□□□ 1.13
PRKCD-202ENST00000394729 RHOXF2Q9BQY4 288 aa22.08■■□□□ 1.13
PRKCD-202ENST00000394729 INO80B-WBP1J3KQ70 363 aa22.08■■□□□ 1.13
PRKCD-202ENST00000394729 MYCNP04198 464 aaPredicted RBP22.08■■□□□ 1.13
PRKCD-202ENST00000394729 EPC2Q52LR7 807 aa22.08■■□□□ 1.13
PRKCD-202ENST00000394729 MKNK1Q9BUB5 465 aa22.08■■□□□ 1.13
PRKCD-202ENST00000394729 INO80BQ9C086 356 aaPredicted RBP22.08■■□□□ 1.13
PRKCD-202ENST00000394729 HYOU1Q9Y4L1 999 aa22.08■■□□□ 1.13
PRKCD-202ENST00000394729 BIRC3Q13489 604 aa22.07■■□□□ 1.12
PRKCD-202ENST00000394729 SPOPLQ6IQ16 392 aa22.07■■□□□ 1.12
PRKCD-202ENST00000394729 SLC20A1Q8WUM9 679 aa22.07■■□□□ 1.12
PRKCD-202ENST00000394729 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms