RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 PDLIM2Q96JY6 352 aa15.41■□□□□ 0.06
PPARGC1B-203ENST00000394320 ZWILCHQ9H900 591 aa15.41■□□□□ 0.06
PPARGC1B-203ENST00000394320 C17orf75Q9HAS0 396 aa15.41■□□□□ 0.06
PPARGC1B-203ENST00000394320 SSU72P8A0A1W2PR75 194 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 ZFXP17010 805 aaPredicted RBP15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 CHRNA3P32297 505 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 CCDC38Q502W7 563 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 ZNF394Q53GI3 561 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 ANKRD40Q6AI12 368 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 ZBED2Q9BTP6 218 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 RGL1Q9NZL6 768 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 WDR35Q9P2L0 1181 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 SUCLA2Q9P2R7 463 aaPredicted RBP15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 SMIM5Q71RC9 77 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 ELMOD1Q8N336 334 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 POLR3CQ9BUI4 534 aaPredicted RBP15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 FAM187AA6NFU0 413 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 M0QYV0 167 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 CASQ2O14958 399 aaPredicted RBP15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 P4HA2O15460 535 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 PSMC1P62191 440 aaKnown RBP15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 SAAL1Q96ER3 474 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 INPP5FQ9Y2H2 1132 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 SALL1Q9NSC2 1324 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 A0A1B0GTH6 734 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 ARHGAP42A6NI28 874 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 FOXP2O15409 715 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 TRAPPC3O43617 180 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 TMED2Q15363 201 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 MOV10L1Q9BXT6 1211 aaKnown RBP15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 VPS33BQ9H267 617 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 ZFYVE28Q9HCC9 887 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 PPP2R3BQ9Y5P8 575 aa15.4■□□□□ 0.06
PPARGC1B-203ENST00000394320 ZWINTO95229 277 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 FTLP02792 175 aaPredicted RBP15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 HSPA8P11142 646 aaKnown RBP15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 SLC1A1P43005 524 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 GPATCH11Q8N954 259 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 SLITRK6Q9H5Y7 841 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 TNS2Q63HR2 1409 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 KIF20BQ96Q89 1820 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 PSMD6Q15008 389 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 CDO1Q16878 200 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 SKA2Q8WVK7 121 aaPredicted RBP15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 HSPH1Q92598 858 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 KIF12Q96FN5 646 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 NUP85Q9BW27 656 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 AP1M1Q9BXS5 423 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 KIF9Q9HAQ2 790 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 RBP5P82980 135 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 PPP6R3Q5H9R7 873 aaPredicted RBP15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 RUBCNQ92622 972 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 PGBD4Q96DM1 585 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 STK33Q9BYT3 514 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 FAM217BQ9NTX9 383 aaPredicted RBP15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 PARVAQ9NVD7 372 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 HSPBP1Q9NZL4 362 aa15.39■□□□□ 0.05
PPARGC1B-203ENST00000394320 SRGNP10124 158 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 IQCB1Q15051 598 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 RBBP5Q15291 538 aaKnown RBP15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 KLC3Q6P597 504 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 GPRC5AQ8NFJ5 357 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 KAZALD1Q96I82 304 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 MAGEB5Q9BZ81 275 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 GFPT1Q06210 699 aaPredicted RBP15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 DBN1Q16643 649 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 KCTD16Q68DU8 428 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 FAF2Q96CS3 445 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 VCX3AQ9NNX9 186 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 A8MXQ7 604 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 IL18RAPO95256 599 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 NMT1P30419 496 aaKnown RBP15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 CASP8Q14790 479 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 CYFIP1Q7L576 1253 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 FAM8A1Q9UBU6 413 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 BAG5Q9UL15 447 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 FAN1Q9Y2M0 1017 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 COL3A1P02461 1466 aaPredicted RBP15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 TEX33O43247 280 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 HBP1O60381 514 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 ICAM1P05362 532 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 TRIM49P0CI25 452 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 TRIM49CP0CI26 452 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 FDPSP14324 419 aaKnown RBP15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 PAPOLAP51003 745 aaKnown RBP15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 EFHC2Q5JST6 749 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 AGPAT1Q99943 283 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 REEP2Q9BRK0 252 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 UVRAGQ9P2Y5 699 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 BAIAP2L1Q9UHR4 511 aa15.38■□□□□ 0.05
PPARGC1B-203ENST00000394320 FER1L4A9Z1Z3 1794 aa15.37■□□□□ 0.05
PPARGC1B-203ENST00000394320 RRN3P2A6NIE6 340 aa15.37■□□□□ 0.05
PPARGC1B-203ENST00000394320 RTN2O75298 545 aa15.37■□□□□ 0.05
PPARGC1B-203ENST00000394320 KRT38O76015 456 aa15.37■□□□□ 0.05
PPARGC1B-203ENST00000394320 NNTQ13423 1086 aa15.37■□□□□ 0.05
PPARGC1B-203ENST00000394320 IER5Q5VY09 327 aa15.37■□□□□ 0.05
PPARGC1B-203ENST00000394320 CDKL3Q8IVW4 592 aaPredicted RBP15.37■□□□□ 0.05
PPARGC1B-203ENST00000394320 EXOC4Q96A65 974 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms