RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 INPP5FQ9Y2H2 1132 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 EIF3HO15372 352 aaKnown RBP eCLIP14.17□□□□□ -0.14
USP49-203ENST00000394253 RASGRF1Q13972 1273 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 FASTKD1Q53R41 847 aaKnown RBP14.17□□□□□ -0.14
USP49-203ENST00000394253 CCDC60Q8IWA6 550 aaPredicted RBP14.17□□□□□ -0.14
USP49-203ENST00000394253 SNF8Q96H20 258 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 CNPY3Q9BT09 278 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 PACSIN1Q9BY11 444 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 MRPL11Q9Y3B7 192 aaKnown RBP14.17□□□□□ -0.14
USP49-203ENST00000394253 NDUFA8P51970 172 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 ZMYM4Q5VZL5 1548 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 A0A1W2PRG6 482 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 CCT8P50990 548 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 KDSRQ06136 332 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 PMF1Q6P1K2 205 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 CNDP1Q96KN2 507 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 TCP11X1B4DZS4 312 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 KIAA1841Q6NSI8 718 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 ATXN8OSP0DMR3 200 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 ITPRIPL1Q6GPH6 555 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 RHPN2Q8IUC4 686 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 SRPK1Q96SB4 655 aaKnown RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 TM6SF1Q9BZW5 370 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 SLC7A5P2Q9GIP4 190 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 TAF1DQ9H5J8 278 aaPredicted RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 CD209Q9NNX6 404 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 DLGAP2Q9P1A6 1054 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 MARK3P27448 753 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 FLT3P36888 993 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 ZBED6P86452 979 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 TRIP13Q15645 432 aaPredicted RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 ZNF544Q6NX49 715 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 ENKURQ8TC29 256 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 SYMPKQ92797 1274 aaKnown RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 CYFIP2Q96F07 1278 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 RMI1Q9H9A7 625 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 CCDC87Q9NVE4 849 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 DDAH1O94760 285 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 PSMC3P17980 439 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 CSE1LP55060 971 aaKnown RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 PLOD1Q02809 727 aaPredicted RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 LRRC63Q05C16 580 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 LGALS3BPQ08380 585 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 SPANXN2Q5MJ10 180 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 XPO6Q96QU8 1125 aaKnown RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 USP44Q9H0E7 712 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 ZNF18P17022 549 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 VHLP40337 213 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 CPXCR1Q8N123 301 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 FAM133AQ8N9E0 248 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 GANCQ8TET4 914 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 SLC7A3Q8WY07 619 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 TMA16Q96EY4 203 aaKnown RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 AP1M1Q9BXS5 423 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 HDHD2Q9H0R4 259 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 VPS11Q9H270 941 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 POTEIP0CG38 1075 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 EIF6P56537 245 aaKnown RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 HMG20AQ9NP66 347 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 ZMYM3Q14202 1370 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 SNX30Q5VWJ9 437 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 WDR17Q8IZU2 1322 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 GOLGA8SH3BPF8 625 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 PIK3CDO00329 1044 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 ENO1P06733 434 aaKnown RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 LRRC74AQ0VAA2 488 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 PDAP1Q13442 181 aaKnown RBP14.16□□□□□ -0.14
USP49-203ENST00000394253 SPDYAQ5MJ70 313 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 CROCCP3Q8IVE0 287 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 VPS37AQ8NEZ2 397 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 HSPH1Q92598 858 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 SLC13A1Q9BZW2 595 aa14.16□□□□□ -0.14
USP49-203ENST00000394253 GUCA1AP43080 201 aaPredicted RBP14.15□□□□□ -0.14
USP49-203ENST00000394253 RASSF5Q8WWW0 418 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 SH3KBP1Q96B97 665 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 POLR2MP0CAP2 368 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 HNMTP50135 292 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 NACC1Q96RE7 527 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 TRIM62Q9BVG3 475 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 WDR7Q9Y4E6 1490 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 MAGEA13PA6NCF6 341 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 ALDH18A1P54886 795 aaKnown RBP14.15□□□□□ -0.14
USP49-203ENST00000394253 A0A1W2PQ27 194 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 A0A1W2PQ64 194 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 A0A1W2PQD8 194 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 USP1O94782 785 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 LRRC36Q1X8D7 754 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 ZNF568Q3ZCX4 644 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 ZNF513Q8N8E2 541 aaPredicted RBP14.15□□□□□ -0.14
USP49-203ENST00000394253 DSCC1Q9BVC3 393 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 MOV10L1Q9BXT6 1211 aaKnown RBP14.15□□□□□ -0.14
USP49-203ENST00000394253 ZFYVE9O95405 1425 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 IRS4O14654 1257 aaPredicted RBP14.15□□□□□ -0.14
USP49-203ENST00000394253 WARSP23381 471 aaKnown RBP14.15□□□□□ -0.14
USP49-203ENST00000394253 CTCFP49711 727 aaPredicted RBP14.15□□□□□ -0.14
USP49-203ENST00000394253 KRT31Q15323 416 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 TBC1D22AQ8WUA7 517 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 KIF20BQ96Q89 1820 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 NDUFAF6Q330K2 333 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 TTC30BQ8N4P2 665 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms