RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 AUTS2Q8WXX7 1259 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 APOL5Q9BWW9 433 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 PHF7Q9BWX1 381 aaPredicted RBP20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 ZBP1Q9H171 429 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 HCN4Q9Y3Q4 1203 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 ARIH1Q9Y4X5 557 aaPredicted RBP20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 HCFC2Q9Y5Z7 792 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 TSPAN1O60635 241 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 CLASP2O75122 1294 aaKnown RBP20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 SPATA31C1P0DKV0 1188 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 ARL2P36404 184 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 SLC11A1P49279 550 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 RARRES1P49788 294 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 CCDC83Q8IWF9 413 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 PIGOQ8TEQ8 1089 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 RSPH1Q8WYR4 309 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 TMEM169Q96HH4 297 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 ANKEF1Q9NU02 776 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 LIMCH1Q9UPQ0 1083 aa20.33■□□□□ 0.85
PDLIM7-205ENST00000393551 CXCL14O95715 111 aa20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 CAPSQ13938 189 aa20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 TRIM29Q14134 588 aa20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 AMHR2Q16671 573 aa20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 DDX53Q86TM3 631 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 IFNLR1Q8IU57 520 aaPredicted RBP20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 PGBD4Q96DM1 585 aa20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 RPGRIP1Q96KN7 1286 aa20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 EIF2AQ9BY44 585 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 GBP3Q9H0R5 595 aa20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 RNF39Q9H2S5 420 aa20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 RSAD1Q9HA92 442 aa20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 IRAK3Q9Y616 596 aa20.32■□□□□ 0.84
PDLIM7-205ENST00000393551 DGAT1O75907 488 aa20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 CTSAP10619 480 aa20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 NCLP19338 710 aaKnown RBP20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 ATP2B1P20020 1258 aa20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 GLRA2P23416 452 aa20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 MCM7P33993 719 aa20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 MBTD1Q05BQ5 628 aa20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 MXD4Q14582 209 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 HFE2Q6ZVN8 426 aa20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 FEZF2Q8TBJ5 459 aa20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 FAM122AQ96E09 287 aa20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 CPB2Q96IY4 423 aa20.31■□□□□ 0.84
PDLIM7-205ENST00000393551 MYO10Q9HD67 2058 aa20.3■□□□□ 0.84
PDLIM7-205ENST00000393551 MED24O75448 989 aa20.3■□□□□ 0.84
PDLIM7-205ENST00000393551 POMCP01189 267 aa20.3■□□□□ 0.84
PDLIM7-205ENST00000393551 HOXB8P17481 243 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-205ENST00000393551 RNASELQ05823 741 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-205ENST00000393551 POU5F1BQ06416 359 aa20.3■□□□□ 0.84
PDLIM7-205ENST00000393551 CATSPER3Q86XQ3 398 aa20.3■□□□□ 0.84
PDLIM7-205ENST00000393551 EDAQ92838 391 aa20.3■□□□□ 0.84
PDLIM7-205ENST00000393551 HES2Q9Y543 173 aa20.3■□□□□ 0.84
PDLIM7-205ENST00000393551 IPPQ9Y573 584 aa20.3■□□□□ 0.84
PDLIM7-205ENST00000393551 CNTNAP2Q9UHC6 1331 aa20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 TDRD15B5MCY1 1934 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 CENPBP07199 599 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 SRGAP2BP0DMP2 458 aa20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 C8orf34Q49A92 452 aa20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 KANK3Q6NY19 840 aa20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 CASP10Q92851 521 aa20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 LLPHQ9BRT6 129 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 GPRC5CQ9NQ84 441 aa20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 MIOSQ9NXC5 875 aa20.29■□□□□ 0.84
PDLIM7-205ENST00000393551 ZDBF2Q9HCK1 2354 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 INO80B-WBP1J3KQ70 363 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 INPPL1O15357 1258 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 B4GALT5O43286 388 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 ERLIN2O94905 339 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 XRCC6P12956 609 aaKnown RBP eCLIP20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 EPCAMP16422 314 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 ARF4P18085 180 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 PCBP1Q15365 356 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■■■■■ 32.7
PDLIM7-205ENST00000393551 PTPN14Q15678 1187 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 ZNF174Q15697 407 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 C12orf76Q8N812 135 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 FBXO18Q8NFZ0 1043 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 URGCPQ8TCY9 931 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 SLC22A17Q8WUG5 538 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 C8orf76Q96K31 380 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 NFKBIZQ9BYH8 718 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 CSRNP2Q9H175 543 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 POLR3FQ9H1D9 316 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 MARCH5Q9NX47 278 aa20.28■□□□□ 0.84
PDLIM7-205ENST00000393551 ARL5CA6NH57 179 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 NRP1O14786 923 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 USO1O60763 962 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 LILRB3O75022 631 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 EFEMP2O95967 443 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 AXLP30530 894 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 CA8P35219 290 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 TFDP1Q14186 410 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 NOTUMQ6P988 496 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 CDR2LQ86X02 465 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 ZFP42Q96MM3 310 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 GAD1Q99259 594 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 TMEM175Q9BSA9 504 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 ADAM7Q9H2U9 754 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms