RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CACNB1Q02641 598 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 GIT2Q14161 759 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 GRIN2CQ14957 1233 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 RESP18Q5W5W9 173 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 CMTR2Q8IYT2 770 aaKnown RBP20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 IQUBQ8NA54 791 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 PGBD4Q96DM1 585 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 REEP2Q9BRK0 252 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 KIFC3Q9BVG8 833 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 MYH11P35749 1972 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 PHLPP2Q6ZVD8 1323 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 ADGRA3Q8IWK6 1321 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 SZT2Q5T011 3432 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 ERVK-21P61565 698 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 PRPF4BQ13523 1007 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 TMEM132AQ24JP5 1023 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 ADALQ6DHV7 355 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 ZNF598Q86UK7 904 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 CNNM3Q8NE01 707 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 SAMD11Q96NU1 681 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 CCDC113Q9H0I3 377 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 CUEDC2Q9H467 287 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 ZHX3Q9H4I2 956 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 TMEM134Q9H6X4 195 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 CERS4Q9HA82 394 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 RC3H2Q9HBD1 1191 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 PCDHB2Q9Y5E7 798 aa20.94■□□□□ 0.94
PDLIM7-204ENST00000393546 A0A1B0GUA9 196 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 TBKBP1A7MCY6 615 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 SLC16A4O15374 487 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 B4GALT5O43286 388 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 TBCAO75347 108 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 FGFR1P11362 822 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 GATMP50440 423 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 PAN2Q504Q3 1202 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 UBXN11Q5T124 520 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 MRPL10Q7Z7H8 261 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 ABI1Q8IZP0 508 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 MYCT1Q8N699 235 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 ARNTL2Q8WYA1 636 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 DHX58Q96C10 678 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 CDX2Q99626 313 aaPredicted RBP20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 PYM1Q9BRP8 204 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 LRRC27Q9C0I9 530 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 TMEM117Q9H0C3 514 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 PARVGQ9HBI0 331 aa20.93■□□□□ 0.94
PDLIM7-204ENST00000393546 MYMKA6NI61 221 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 H0YCG3 227 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 POLR2DO15514 142 aaKnown RBP20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 CMA1P23946 247 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 E2F4Q16254 413 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 SLC27A1Q6PCB7 646 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 DYMQ7RTS9 669 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 DDX12PQ92771 950 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 GUCD1Q96NT3 240 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 TRIM6Q9C030 488 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 PRDM12Q9H4Q4 367 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 ARHGAP28Q9P2N2 729 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 RWDD3Q9Y3V2 267 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 CNTNAP2Q9UHC6 1331 aa20.92■□□□□ 0.94
PDLIM7-204ENST00000393546 N4BP3O15049 544 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 ATF7P17544 494 aaPredicted RBP20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 ZNF131P52739 623 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 AMPD3Q01432 767 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 LONRF3Q496Y0 759 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 TMEM192Q8IY95 271 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 CASD1Q96PB1 797 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 GAS2L1Q99501 681 aaPredicted RBP20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 C17orf80Q9BSJ5 609 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 EIF2AQ9BY44 585 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 TNMDQ9H2S6 317 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 RNF19AQ9NV58 838 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 MTUS1Q9ULD2 1270 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 KCNH3Q9ULD8 1083 aa20.91■□□□□ 0.94
PDLIM7-204ENST00000393546 COL4A6Q14031 1691 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 TRAK2O60296 914 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 ITGA4P13612 1032 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 SCP2P22307 547 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 STRN3Q13033 797 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 SPRED2Q7Z698 418 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 CDR2LQ86X02 465 aaPredicted RBP20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 HACE1Q8IYU2 909 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 TMEM161BQ8NDZ6 487 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 HELQQ8TDG4 1101 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 RSPH1Q8WYR4 309 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 CLP1Q92989 425 aaKnown RBP20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 LPPQ93052 612 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 ADPGKQ9BRR6 497 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 MAGEF1Q9HAY2 307 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 GDPD2Q9HCC8 539 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 UBN1Q9NPG3 1134 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 CHMP5Q9NZZ3 219 aa20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 MRPL42Q9Y6G3 142 aaKnown RBP20.9■□□□□ 0.94
PDLIM7-204ENST00000393546 TTLL13PA6NNM8 815 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 NPTXRO95502 500 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 BMPR1AP36894 532 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 NCKAP1LP55160 1127 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 EPC2Q52LR7 807 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 CLLU1OSQ5K130 101 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 SPOUT1Q5T280 376 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms