RNA–Protein interactions for RNA: ENST00000393412.7

MDM2-209, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-209ENST00000393412 TMEM60Q9H2L4 133 aa17.86■□□□□ 0.45
MDM2-209ENST00000393412 XRCC6P12956 609 aaKnown RBP eCLIP17.85■□□□□ 0.454e-12■□□□□ 9.3
MDM2-209ENST00000393412 ATP2B1P20020 1258 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 GNL2Q13823 731 aaKnown RBP17.85■□□□□ 0.45
MDM2-209ENST00000393412 CES5AQ6NT32 575 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 ZBTB33Q86T24 672 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 VPS52Q8N1B4 723 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 URGCPQ8TCY9 931 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 TCP11Q8WWU5 503 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 PRPF31Q8WWY3 499 aaKnown RBP17.85■□□□□ 0.45
MDM2-209ENST00000393412 SUSD6Q92537 303 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 TMEM143Q96AN5 459 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 GBP3Q9H0R5 595 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 ANKEF1Q9NU02 776 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 ARID2Q68CP9 1835 aa17.85■□□□□ 0.45
MDM2-209ENST00000393412 C5orf42Q9H799 3197 aa17.84■□□□□ 0.45
MDM2-209ENST00000393412 C2orf71A6NGG8 1288 aa17.84■□□□□ 0.45
MDM2-209ENST00000393412 CD2BP2O95400 341 aaKnown RBP17.84■□□□□ 0.45
MDM2-209ENST00000393412 XKR9Q5GH70 373 aa17.84■□□□□ 0.45
MDM2-209ENST00000393412 TRIM67Q6ZTA4 783 aa17.84■□□□□ 0.45
MDM2-209ENST00000393412 SRGAP1Q7Z6B7 1085 aa17.84■□□□□ 0.45
MDM2-209ENST00000393412 S1PR5Q9H228 398 aa17.84■□□□□ 0.45
MDM2-209ENST00000393412 KCNH6Q9H252 994 aa17.84■□□□□ 0.45
MDM2-209ENST00000393412 IFT122Q9HBG6 1241 aa17.84■□□□□ 0.45
MDM2-209ENST00000393412 BMP2KQ9NSY1 1161 aaPredicted RBP17.84■□□□□ 0.45
MDM2-209ENST00000393412 NOL7Q9UMY1 257 aaKnown RBP17.84■□□□□ 0.45
MDM2-209ENST00000393412 PCDHB2Q9Y5E7 798 aa17.84■□□□□ 0.45
MDM2-209ENST00000393412 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.83■□□□□ 0.45
MDM2-209ENST00000393412 ZBTB39O15060 712 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 ASAP2O43150 1006 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 ZNF623O75123 536 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 OR52Z1P0C646 297 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 ZXDAP98168 799 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 NCBP1Q09161 790 aaKnown RBP17.83■□□□□ 0.45
MDM2-209ENST00000393412 LAMTOR4Q0VGL1 99 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 KCNC3Q14003 757 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 GIT2Q14161 759 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 EMC2Q15006 297 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 ZNF174Q15697 407 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 TTC38Q5R3I4 469 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 SYCE2Q6PIF2 218 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 PBXIP1Q96AQ6 731 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 CCDC43Q96MW1 224 aaKnown RBP17.83■□□□□ 0.45
MDM2-209ENST00000393412 FAM193BQ96PV7 902 aaPredicted RBP17.83■□□□□ 0.45
MDM2-209ENST00000393412 TSHZ2Q9NRE2 1034 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 AGPAT5Q9NUQ2 364 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 TBC1D13Q9NVG8 400 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 NR2E1Q9Y466 385 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 HCFC2Q9Y5Z7 792 aa17.83■□□□□ 0.45
MDM2-209ENST00000393412 TMEM221A6NGB7 291 aa17.82■□□□□ 0.44
MDM2-209ENST00000393412 M0R296 226 aa17.82■□□□□ 0.44
MDM2-209ENST00000393412 ERLIN2O94905 339 aa17.82■□□□□ 0.44
MDM2-209ENST00000393412 SP100P23497 879 aaPredicted RBP17.82■□□□□ 0.44
MDM2-209ENST00000393412 ITIH3Q06033 890 aa17.82■□□□□ 0.44
MDM2-209ENST00000393412 DDX53Q86TM3 631 aaKnown RBP17.82■□□□□ 0.44
MDM2-209ENST00000393412 SUGP1Q8IWZ8 645 aaKnown RBP17.82■□□□□ 0.44
MDM2-209ENST00000393412 RNF149Q8NC42 400 aa17.82■□□□□ 0.44
MDM2-209ENST00000393412 IGSF21Q96ID5 467 aa17.82■□□□□ 0.44
MDM2-209ENST00000393412 TUFT1Q9NNX1 390 aa17.82■□□□□ 0.44
MDM2-209ENST00000393412 KANSL3Q9P2N6 904 aa17.82■□□□□ 0.44
MDM2-209ENST00000393412 POTEMA6NI47 508 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 SPDYE4A6NLX3 237 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 CLASP2O75122 1294 aaKnown RBP17.81■□□□□ 0.44
MDM2-209ENST00000393412 OFD1O75665 1012 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 DGAT1O75907 488 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 SPATA31C1P0DKV0 1188 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 C4orf32Q8N8J7 132 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 NECTIN4Q96NY8 510 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 MTRQ99707 1265 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 POLR3CQ9BUI4 534 aaPredicted RBP17.81■□□□□ 0.44
MDM2-209ENST00000393412 NRDE2Q9H7Z3 1164 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 STK39Q9UEW8 545 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 MEIS3P2A8K0S8 358 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 GALTP07902 379 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 RARRES1P49788 294 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 TOB1P50616 345 aaPredicted RBP17.81■□□□□ 0.44
MDM2-209ENST00000393412 POU5F1BQ06416 359 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 TFDP1Q14186 410 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 MXD4Q14582 209 aaPredicted RBP17.81■□□□□ 0.44
MDM2-209ENST00000393412 FERMT3Q86UX7 667 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 CATSPER3Q86XQ3 398 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 ERMNQ8TAM6 284 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 FBXL18Q96ME1 805 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 RIPOR3Q96MK2 946 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 ZBP1Q9H171 429 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 ADAM7Q9H2U9 754 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 RSAD1Q9HA92 442 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 XPNPEP1Q9NQW7 623 aa17.81■□□□□ 0.44
MDM2-209ENST00000393412 CNTNAP2Q9UHC6 1331 aa17.8■□□□□ 0.44
MDM2-209ENST00000393412 CTSAP10619 480 aa17.8■□□□□ 0.44
MDM2-209ENST00000393412 MUTP22033 750 aa17.8■□□□□ 0.44
MDM2-209ENST00000393412 RPA1P27694 616 aa17.8■□□□□ 0.44
MDM2-209ENST00000393412 MTHFRP42898 656 aa17.8■□□□□ 0.44
MDM2-209ENST00000393412 FXR2P51116 673 aaKnown RBP eCLIP17.8■□□□□ 0.442e-6■■■□□ 16.3
MDM2-209ENST00000393412 PCBP1Q15365 356 aaKnown RBP eCLIP17.8■□□□□ 0.44
MDM2-209ENST00000393412 BMP8AQ7Z5Y6 402 aa17.8■□□□□ 0.44
MDM2-209ENST00000393412 TMEM173Q86WV6 379 aaPredicted RBP17.8■□□□□ 0.44
MDM2-209ENST00000393412 CNNM3Q8NE01 707 aa17.8■□□□□ 0.44
MDM2-209ENST00000393412 AUTS2Q8WXX7 1259 aa17.8■□□□□ 0.44
MDM2-209ENST00000393412 NACC1Q96RE7 527 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms