RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 ACTR2P61160 394 aa8.71□□□□□ -1.02
ATXN3-203ENST00000393287 SGSM1Q2NKQ1 1148 aa8.71□□□□□ -1.02
ATXN3-203ENST00000393287 GNASQ5JWF2 1037 aa8.71□□□□□ -1.02
ATXN3-203ENST00000393287 CYP4F22Q6NT55 531 aa8.71□□□□□ -1.02
ATXN3-203ENST00000393287 C4orf50Q6ZRC1 276 aa8.71□□□□□ -1.02
ATXN3-203ENST00000393287 RPUSD2Q8IZ73 545 aaKnown RBP8.71□□□□□ -1.02
ATXN3-203ENST00000393287 TTC13Q8NBP0 860 aa8.71□□□□□ -1.02
ATXN3-203ENST00000393287 FAM213AQ9BRX8 229 aa8.71□□□□□ -1.02
ATXN3-203ENST00000393287 INTS2Q9H0H0 1204 aaKnown RBP8.71□□□□□ -1.02
ATXN3-203ENST00000393287 AGO4Q9HCK5 861 aaKnown RBP8.71□□□□□ -1.02
ATXN3-203ENST00000393287 NXF1Q9UBU9 619 aaKnown RBP8.71□□□□□ -1.02
ATXN3-203ENST00000393287 CLTAP09496 248 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 CREMQ03060 361 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 TMEM132DQ14C87 1099 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 PLCD3Q8N3E9 789 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 KIF12Q96FN5 646 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 CLMNQ96JQ2 1002 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 WDR35Q9P2L0 1181 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 C4BP0C0L5 1744 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 RHOBTB3O94955 611 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 ACADSBP45954 432 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 TAF2Q6P1X5 1199 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 LRRC31Q6UY01 552 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 NFASCO94856 1347 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 MIF4GDA9UHW6 222 aaKnown RBP8.7□□□□□ -1.02
ATXN3-203ENST00000393287 EGFRP00533 1210 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 MAP2K2P36507 400 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 SLC12A2P55011 1212 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 ATF7IP2Q5U623 682 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-203ENST00000393287 EP400NLQ6ZTU2 488 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 CDKL2Q92772 493 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 RBM41Q96IZ5 413 aaKnown RBP8.7□□□□□ -1.02
ATXN3-203ENST00000393287 SGIP1Q9BQI5 828 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 HMX1Q9NP08 348 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-203ENST00000393287 ALDH5A1P51649 535 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-203ENST00000393287 ELAVL2Q12926 359 aaKnown RBP8.7□□□□□ -1.02
ATXN3-203ENST00000393287 MUM1L1Q5H9M0 696 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 EFCAB12Q6NXP0 572 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 ZNF677Q86XU0 584 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 NME8Q8N427 588 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 AGXT2Q9BYV1 514 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 DOT1LQ8TEK3 1739 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 MCF2LO15068 1137 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 ZFXP17010 805 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-203ENST00000393287 PGM5Q15124 567 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 STK39Q9UEW8 545 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 UBQLN1Q9UMX0 589 aaKnown RBP8.7□□□□□ -1.02
ATXN3-203ENST00000393287 PPP2R2CQ9Y2T4 447 aa8.7□□□□□ -1.02
ATXN3-203ENST00000393287 LAMB4A4D0S4 1761 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 SPEF2Q9C093 1822 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 CRCPO75575 148 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 CYP11B2P19099 503 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 ANKS4BQ8N8V4 417 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 FBXL13Q8NEE6 735 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 PPM1EQ8WY54 764 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 MRPL9Q9BYD2 267 aaKnown RBP8.69□□□□□ -1.02
ATXN3-203ENST00000393287 UNC45AQ9H3U1 944 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 RGPD1P0DJD0 1748 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 AFDNP55196 1824 aaKnown RBP8.69□□□□□ -1.02
ATXN3-203ENST00000393287 MOCS3O95396 460 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 PCSK1P29120 753 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 ARPP19P56211 112 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 APBA1Q02410 837 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 NT5DC4Q86YG4 428 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 YAF2Q8IY57 180 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 SYT2Q8N9I0 419 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-203ENST00000393287 IL25Q9H293 177 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 TSPYL2Q9H2G4 693 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-203ENST00000393287 STARD7Q9NQZ5 370 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 ATRNL1Q5VV63 1379 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 PIK3CDO00329 1044 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 GIPC1O14908 333 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 KPNA2P52292 529 aaKnown RBP8.69□□□□□ -1.02
ATXN3-203ENST00000393287 SGO2Q562F6 1265 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 SPATA2LQ8IUW3 424 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-203ENST00000393287 RAB3IL1Q8TBN0 382 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 SYTL5Q8TDW5 730 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-203ENST00000393287 FAM114A2Q9NRY5 505 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 DNAJC12Q9UKB3 198 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 INPP5FQ9Y2H2 1132 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 COL18A1P39060 1754 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 PARNO95453 639 aaKnown RBP8.69□□□□□ -1.02
ATXN3-203ENST00000393287 ARHGAP15Q53QZ3 475 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 BTNL9Q6UXG8 535 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 STKLD1Q8NE28 680 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 PIDD1Q9HB75 910 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 SAMD15Q9P1V8 674 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 IP6K2Q9UHH9 426 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 HPS5Q9UPZ3 1129 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 MSH4O15457 936 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 ATF2P15336 505 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 OSTNP61366 133 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 PFDN4Q9NQP4 134 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 HSPBP1Q9NZL4 362 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 AP3B1O00203 1094 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 CLCN1P35523 988 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 SFSWAPQ12872 951 aaKnown RBP8.69□□□□□ -1.02
ATXN3-203ENST00000393287 PLCB4Q15147 1175 aa8.69□□□□□ -1.02
ATXN3-203ENST00000393287 CFAP157Q5JU67 520 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms