RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SCFD1Q8WVM8 642 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 ACO2Q99798 780 aaKnown RBP14.6□□□□□ -0.07
USP44-202ENST00000393091 MINDY3Q9H8M7 445 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 C1orf112Q9NSG2 853 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 NOC2LQ9Y3T9 749 aaKnown RBP14.6□□□□□ -0.07
USP44-202ENST00000393091 PRKCSHP14314 528 aaPredicted RBP14.6□□□□□ -0.07
USP44-202ENST00000393091 BMP6P22004 513 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 ADSSL1Q8N142 457 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 DEPTORQ8TB45 409 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 ACCSQ96QU6 501 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 BPIFA3Q9BQP9 254 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 TSPYL2Q9H2G4 693 aaPredicted RBP14.6□□□□□ -0.07
USP44-202ENST00000393091 BLZF1Q9H2G9 400 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 PRO3102Q9H379 93 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 TMX1Q9H3N1 280 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 EXOC7Q9UPT5 735 aa14.6□□□□□ -0.07
USP44-202ENST00000393091 N4BP3O15049 544 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 FAM189A1O60320 539 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 KRT18P05783 430 aaKnown RBP14.59□□□□□ -0.07
USP44-202ENST00000393091 MCL1Q07820 350 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 GOLGA5Q8TBA6 731 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 DHTKD1Q96HY7 919 aaPredicted RBP14.59□□□□□ -0.07
USP44-202ENST00000393091 TBC1D7Q9P0N9 293 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 PDXKO00764 312 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 MYCNP04198 464 aaPredicted RBP14.59□□□□□ -0.07
USP44-202ENST00000393091 SSBP05455 408 aaKnown RBP eCLIP14.59□□□□□ -0.07
USP44-202ENST00000393091 SKIP12755 728 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 GARTP22102 1010 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 HERC4Q5GLZ8 1057 aaPredicted RBP14.59□□□□□ -0.07
USP44-202ENST00000393091 CENPPQ6IPU0 288 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 MLKLQ8NB16 471 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 MRPL4Q9BYD3 311 aaKnown RBP14.59□□□□□ -0.07
USP44-202ENST00000393091 DMAC2Q9NW81 257 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.59□□□□□ -0.07
USP44-202ENST00000393091 RAB27AP51159 221 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 NLRP12P59046 1061 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 MAPK6Q16659 721 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 DCAF4L1Q3SXM0 396 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 SMYD5Q6GMV2 418 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 KSR1Q8IVT5 923 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 NLRP7Q8WX94 980 aa14.59□□□□□ -0.07
USP44-202ENST00000393091 ABHD14A-ACY1A0A1B0GW23 586 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 PPP1R3GB7ZBB8 358 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 EVI5O60447 810 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 EDN1P05305 212 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 STK4Q13043 487 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 KIZQ2M2Z5 673 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 EDRF1Q3B7T1 1238 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 XKR4Q5GH76 650 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 UBXN11Q5T124 520 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 HERVK_113Q902F9 699 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 FBXL18Q96ME1 805 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 FAM49AQ9H0Q0 323 aaPredicted RBP14.58□□□□□ -0.08
USP44-202ENST00000393091 UMODL1Q5DID0 1318 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 GBF1Q92538 1859 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 PRKCBP05771 671 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 MCF2P10911 925 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 CASP5P51878 434 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 STAMQ92783 540 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 AGO3Q9H9G7 860 aaKnown RBP14.58□□□□□ -0.08
USP44-202ENST00000393091 MRPL44Q9H9J2 332 aaKnown RBP14.58□□□□□ -0.08
USP44-202ENST00000393091 NR2E3Q9Y5X4 410 aa14.58□□□□□ -0.08
USP44-202ENST00000393091 TTC3P53804 2025 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 DENND3A2RUS2 1198 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 K7ERI5 159 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 SLC16A4O15374 487 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 KNOP1Q1ED39 458 aaKnown RBP14.57□□□□□ -0.08
USP44-202ENST00000393091 SLFN12LQ6IEE8 588 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 SLC39A4Q6P5W5 647 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 APBB1IPQ7Z5R6 666 aaPredicted RBP14.57□□□□□ -0.08
USP44-202ENST00000393091 SEPT8Q92599 483 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 OSMRQ99650 979 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 FGFBP2Q9BYJ0 223 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 PDZD7Q9H5P4 517 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 PADI3Q9ULW8 664 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 CITO14578 2027 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 K7ENM7 598 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 RPS6KA5O75582 802 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 CAVIN2O95810 425 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 ERCC5P28715 1186 aaPredicted RBP14.57□□□□□ -0.08
USP44-202ENST00000393091 CASP1P29466 404 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 ZNF598Q86UK7 904 aaKnown RBP14.57□□□□□ -0.08
USP44-202ENST00000393091 PPP1R13LQ8WUF5 828 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 ST3GAL5Q9UNP4 418 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 BRCA2P51587 3418 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 TDRD15B5MCY1 1934 aaKnown RBP14.57□□□□□ -0.08
USP44-202ENST00000393091 TGFB1I1O43294 461 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 TOM1L1O75674 476 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 EOMESO95936 686 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 MYBP10242 640 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 NMT1P30419 496 aaKnown RBP14.57□□□□□ -0.08
USP44-202ENST00000393091 FPGSQ05932 587 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 PAK2Q13177 524 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 NOTUMQ6P988 496 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 PSRC1Q6PGN9 363 aaPredicted RBP14.57□□□□□ -0.08
USP44-202ENST00000393091 MYOCDQ8IZQ8 938 aa14.57□□□□□ -0.08
USP44-202ENST00000393091 TYW1Q9NV66 732 aaKnown RBP14.57□□□□□ -0.08
USP44-202ENST00000393091 A0A0B4J269 797 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 LRRIQ4A6NIV6 560 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 SFI1A8K8P3 1242 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms