RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 NCAPHQ15003 741 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 ENOSF1Q7L5Y1 443 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 FBXL13Q8NEE6 735 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 AGPAT5Q9NUQ2 364 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 IP6K2Q9UHH9 426 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 CFAP69A5D8W1 941 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 FAM196BA6NMK8 535 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 F5H6K3 240 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 KITP10721 976 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 OSBPP22059 807 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 GNA15P30679 374 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 KLRC3Q07444 240 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 DPYDQ12882 1025 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 GIPC2Q8TF65 315 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 CCT8L2Q96SF2 557 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 ARAP3Q8WWN8 1544 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 SDC4P31431 198 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 COPS2P61201 443 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 ADGRF4Q8IZF3 695 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 EPN3Q9H201 632 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 YY1AP1Q9H869 796 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.96□□□□□ -0.17
LCA5-202ENST00000392959 SLC9A2Q9UBY0 812 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 ZBBXA8MT70 800 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 RAD23BP54727 409 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 DRP2Q13474 957 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 KIF19Q2TAC6 998 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 KIAA1755Q5JYT7 1200 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 TRIM72Q6ZMU5 477 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 ARHGAP27Q6ZUM4 889 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 NUDCD3Q8IVD9 361 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 IGDCC4Q8TDY8 1250 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 EXT2Q93063 718 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 HPS3Q969F9 1004 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 SENP1Q9P0U3 644 aa13.96□□□□□ -0.17
LCA5-202ENST00000392959 RHOBTB3O94955 611 aa13.96□□□□□ -0.18
LCA5-202ENST00000392959 MYBL1P10243 752 aa13.96□□□□□ -0.18
LCA5-202ENST00000392959 ZSCAN20P17040 1043 aaPredicted RBP13.96□□□□□ -0.18
LCA5-202ENST00000392959 HSPA9P38646 679 aaKnown RBP13.96□□□□□ -0.18
LCA5-202ENST00000392959 BCAR1P56945 870 aa13.96□□□□□ -0.18
LCA5-202ENST00000392959 PSMC1P62191 440 aaKnown RBP13.96□□□□□ -0.18
LCA5-202ENST00000392959 STAT4Q14765 748 aa13.96□□□□□ -0.18
LCA5-202ENST00000392959 USP49Q70CQ1 688 aa13.96□□□□□ -0.18
LCA5-202ENST00000392959 CATSPER4Q7RTX7 472 aa13.96□□□□□ -0.18
LCA5-202ENST00000392959 FAM167AQ96KS9 214 aa13.96□□□□□ -0.18
LCA5-202ENST00000392959 TRIM15Q9C019 465 aa13.96□□□□□ -0.18
LCA5-202ENST00000392959 UBN1Q9NPG3 1134 aa13.96□□□□□ -0.18
LCA5-202ENST00000392959 ZNF609O15014 1411 aa13.96□□□□□ -0.18
LCA5-202ENST00000392959 EIF3HO15372 352 aaKnown RBP eCLIP13.95□□□□□ -0.18
LCA5-202ENST00000392959 PYGBP11216 843 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 PAMP19021 973 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 PAPOLAP51003 745 aaKnown RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 MORF4L2Q15014 288 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 TMEM259Q4ZIN3 620 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 CEP70Q8NHQ1 597 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 RIN2Q8WYP3 895 aaPredicted RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 LXNQ9BS40 222 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 AGTP01019 485 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 SFNP31947 248 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 AP2B1P63010 937 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 KRT17Q04695 432 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 YWHAHQ04917 246 aaPredicted RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 SLC27A3Q5K4L6 730 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 SCG3Q8WXD2 468 aaKnown RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 MS4A14Q96JA4 679 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 AGPAT1Q99943 283 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 NDE1Q9NXR1 346 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 NARFQ9UHQ1 456 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 BCORL1Q5H9F3 1711 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 DIAPH2O60879 1101 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 FGFR4P22455 802 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 RWDD4Q6NW29 188 aaKnown RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 EIF2AK1Q9BQI3 630 aaKnown RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 TDRD3Q9H7E2 651 aaKnown RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 TRPC5Q9UL62 973 aaPredicted RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 TRIM33Q9UPN9 1127 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 ATP8B3O60423 1300 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 ABCB11O95342 1321 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 ZNF335Q9H4Z2 1342 aaPredicted RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 SMARCA1P28370 1054 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 ZNF568Q3ZCX4 644 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 DSTYKQ6XUX3 929 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 HAUS6Q7Z4H7 955 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 SPATA21Q7Z572 469 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 FAM84BQ96KN1 310 aaPredicted RBP13.95□□□□□ -0.18
LCA5-202ENST00000392959 SLC24A3Q9HC58 644 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 ARL2BPQ9Y2Y0 163 aa13.95□□□□□ -0.18
LCA5-202ENST00000392959 CFAP74Q9C0B2 1584 aa13.94□□□□□ -0.18
LCA5-202ENST00000392959 ZBTB24O43167 697 aaPredicted RBP13.94□□□□□ -0.18
LCA5-202ENST00000392959 ANXA13P27216 316 aa13.94□□□□□ -0.18
LCA5-202ENST00000392959 STK4Q13043 487 aa13.94□□□□□ -0.18
LCA5-202ENST00000392959 STXBP2Q15833 593 aa13.94□□□□□ -0.18
LCA5-202ENST00000392959 RGS9BPQ6ZS82 235 aa13.94□□□□□ -0.18
LCA5-202ENST00000392959 CCNYL1Q8N7R7 359 aa13.94□□□□□ -0.18
LCA5-202ENST00000392959 ATL2Q8NHH9 583 aa13.94□□□□□ -0.18
LCA5-202ENST00000392959 ZNF473Q8WTR7 871 aaKnown RBP13.94□□□□□ -0.18
LCA5-202ENST00000392959 OSBPL1AQ9BXW6 950 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms