RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 UTRNP46939 3433 aa27.76■■■□□ 2.03
SMARCD3-203ENST00000392811 CNGA1P29973 690 aa27.76■■■□□ 2.03
SMARCD3-203ENST00000392811 PRKCEQ02156 737 aa27.76■■■□□ 2.03
SMARCD3-203ENST00000392811 SNRNP35Q16560 246 aaKnown RBP27.76■■■□□ 2.03
SMARCD3-203ENST00000392811 SAAL1Q96ER3 474 aa27.76■■■□□ 2.03
SMARCD3-203ENST00000392811 C17orf75Q9HAS0 396 aa27.76■■■□□ 2.03
SMARCD3-203ENST00000392811 PDLIM7Q9NR12 457 aa27.76■■■□□ 2.03
SMARCD3-203ENST00000392811 DICER1Q9UPY3 1922 aaKnown RBP27.76■■■□□ 2.03
SMARCD3-203ENST00000392811 TMCO5BA8MYB1 307 aa27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 MXI1P50539 228 aa27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 MCCD1P59942 119 aaPredicted RBP27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 XPNPEP1Q9NQW7 623 aa27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 KCNK3O14649 394 aa27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 DGAT1O75907 488 aa27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 TNFAIP3P21580 790 aa27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 TREML2Q5T2D2 321 aa27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 C8orf74Q6P047 294 aa27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 SLFN11Q7Z7L1 901 aa27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 VIPAS39Q9H9C1 493 aa27.75■■■□□ 2.03
SMARCD3-203ENST00000392811 ADGRA3Q8IWK6 1321 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 CES2O00748 559 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 PMM2O15305 246 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 FAM193AP78312 1265 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 SP2Q02086 613 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 MIS18BP1Q6P0N0 1132 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 SLC39A4Q6P5W5 647 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 MCPH1Q8NEM0 835 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 CHST13Q8NET6 341 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 LMBR1Q8WVP7 490 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 GDAP1L1Q96MZ0 367 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 CYP26B1Q9NR63 512 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 STIM2Q9P246 746 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 NCANO14594 1321 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 PEX10O60683 326 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 TMEM253P0C7T8 217 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 PTPROQ16827 1216 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 ZNF771Q7L3S4 317 aaPredicted RBP27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 AENQ8WTP8 325 aaKnown RBP27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 SELENOOQ9BVL4 669 aa27.74■■■□□ 2.03
SMARCD3-203ENST00000392811 SUPT20HL2P0C7V6 817 aa27.73■■■□□ 2.03
SMARCD3-203ENST00000392811 RNASE9P60153 205 aaKnown RBP27.73■■■□□ 2.03
SMARCD3-203ENST00000392811 CNTN2Q02246 1040 aa27.73■■■□□ 2.03
SMARCD3-203ENST00000392811 FSTL1Q12841 308 aa27.73■■■□□ 2.03
SMARCD3-203ENST00000392811 STXBP2Q15833 593 aa27.73■■■□□ 2.03
SMARCD3-203ENST00000392811 GLE1Q53GS7 698 aaKnown RBP27.73■■■□□ 2.03
SMARCD3-203ENST00000392811 PALB2Q86YC2 1186 aa27.73■■■□□ 2.03
SMARCD3-203ENST00000392811 VTI1AQ96AJ9 217 aa27.73■■■□□ 2.03
SMARCD3-203ENST00000392811 AGPAT1Q99943 283 aa27.73■■■□□ 2.03
SMARCD3-203ENST00000392811 ACBD3Q9H3P7 528 aa27.73■■■□□ 2.03
SMARCD3-203ENST00000392811 MAP2K1Q02750 393 aaPredicted RBP27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 SLC20A1Q8WUM9 679 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 CNKSR2Q8WXI2 1034 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 CCDC127Q96BQ5 260 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 ATP6V0A4Q9HBG4 840 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 SEPT11Q9NVA2 429 aaKnown RBP27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 TAS2R14Q9NYV8 317 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 HPCAL4Q9UM19 191 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 USP20Q9Y2K6 914 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 STXBP5LQ9Y2K9 1186 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 IGSF9BQ9UPX0 1349 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 RTP1P59025 263 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 PEX26Q7Z412 305 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 ANKRD35Q8N283 1001 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 USP38Q8NB14 1042 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 DNERQ8NFT8 737 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 PARD3BQ8TEW8 1205 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 KAT5Q92993 513 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 PBKQ96KB5 322 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 PTPRFP10586 1907 aa27.72■■■□□ 2.03
SMARCD3-203ENST00000392811 TULP1O00294 542 aaPredicted RBP27.71■■■□□ 2.03
SMARCD3-203ENST00000392811 ZBTB48P10074 688 aaPredicted RBP27.71■■■□□ 2.03
SMARCD3-203ENST00000392811 ABCB4P21439 1286 aa27.71■■■□□ 2.03
SMARCD3-203ENST00000392811 XKR3Q5GH77 459 aa27.71■■■□□ 2.03
SMARCD3-203ENST00000392811 LBX2Q6XYB7 198 aa27.71■■■□□ 2.03
SMARCD3-203ENST00000392811 SYCE1Q8N0S2 351 aa27.71■■■□□ 2.03
SMARCD3-203ENST00000392811 SLC35G2Q8TBE7 412 aa27.71■■■□□ 2.03
SMARCD3-203ENST00000392811 CTNNBL1Q8WYA6 563 aaPredicted RBP27.71■■■□□ 2.03
SMARCD3-203ENST00000392811 RFFLQ8WZ73 363 aa27.71■■■□□ 2.03
SMARCD3-203ENST00000392811 OSGEPQ9NPF4 335 aa27.71■■■□□ 2.03
SMARCD3-203ENST00000392811 ICAM3P32942 547 aa27.7■■■□□ 2.03
SMARCD3-203ENST00000392811 MTERF2Q49AM1 385 aa27.7■■■□□ 2.03
SMARCD3-203ENST00000392811 CYFIP1Q7L576 1253 aa27.7■■■□□ 2.03
SMARCD3-203ENST00000392811 DAAM2Q86T65 1068 aa27.7■■■□□ 2.03
SMARCD3-203ENST00000392811 SEMA4DQ92854 862 aa27.7■■■□□ 2.03
SMARCD3-203ENST00000392811 CCDC102AQ96A19 550 aa27.7■■■□□ 2.03
SMARCD3-203ENST00000392811 FBXL18Q96ME1 805 aa27.7■■■□□ 2.03
SMARCD3-203ENST00000392811 POLR3FQ9H1D9 316 aaPredicted RBP27.7■■■□□ 2.03
SMARCD3-203ENST00000392811 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.7■■■□□ 2.03
SMARCD3-203ENST00000392811 BTBD7Q9P203 1132 aa27.7■■■□□ 2.03
SMARCD3-203ENST00000392811 A0A0U1RQG5 324 aaPredicted RBP27.7■■■□□ 2.02
SMARCD3-203ENST00000392811 DDNO94850 711 aaPredicted RBP27.7■■■□□ 2.02
SMARCD3-203ENST00000392811 NT5DC3Q86UY8 548 aa27.7■■■□□ 2.02
SMARCD3-203ENST00000392811 ZNF526Q8TF50 670 aaPredicted RBP27.7■■■□□ 2.02
SMARCD3-203ENST00000392811 POMGNT1Q8WZA1 660 aa27.7■■■□□ 2.02
SMARCD3-203ENST00000392811 POP1Q99575 1024 aaKnown RBP27.7■■■□□ 2.02
SMARCD3-203ENST00000392811 SUCLA2Q9P2R7 463 aaPredicted RBP27.7■■■□□ 2.02
SMARCD3-203ENST00000392811 FAM170AA1A519 330 aa27.69■■■□□ 2.02
SMARCD3-203ENST00000392811 GYS2P54840 703 aa27.69■■■□□ 2.02
SMARCD3-203ENST00000392811 KRT39Q6A163 491 aa27.69■■■□□ 2.02
SMARCD3-203ENST00000392811 METTL13Q8N6R0 699 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms