RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 CLIC4Q9Y696 253 aa13.09□□□□□ -0.31
RFC4-202ENST00000392481 CNTNAP2Q9UHC6 1331 aa13.09□□□□□ -0.31
RFC4-202ENST00000392481 A0A1B0GUA9 196 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 MEIS3P2A8K0S8 358 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 B4GALT5O43286 388 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 OFD1O75665 1012 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 FGF18O76093 207 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
RFC4-202ENST00000392481 PPM1AP35813 382 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 EFNA5P52803 228 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 MRPS5P82675 430 aaKnown RBP13.08□□□□□ -0.32
RFC4-202ENST00000392481 UBE3AQ05086 875 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 CAMK1Q14012 370 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 PTPAQ15257 358 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 AAK1Q2M2I8 961 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 LONRF3Q496Y0 759 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 TMEM119Q4V9L6 283 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 NOMO2Q5JPE7 1267 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 RINT1Q6NUQ1 792 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 KCNT2Q6UVM3 1135 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 AGMOQ6ZNB7 445 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 C1orf186Q6ZWK4 172 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 THNSL1Q8IYQ7 743 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 SYT2Q8N9I0 419 aaPredicted RBP13.08□□□□□ -0.32
RFC4-202ENST00000392481 DEPTORQ8TB45 409 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 CALML4Q96GE6 196 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 CPB2Q96IY4 423 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 DRC1Q96MC2 740 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 ZNF558Q96NG5 402 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 RUSC1Q9BVN2 902 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 UBN1Q9NPG3 1134 aa13.08□□□□□ -0.32
RFC4-202ENST00000392481 MORC2Q9Y6X9 1032 aaPredicted RBP13.08□□□□□ -0.32
RFC4-202ENST00000392481 CARNS1A5YM72 827 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 GUCY2CP25092 1073 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 DNAJB1P25685 340 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 GRIN1Q05586 938 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 MAPK6Q16659 721 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 TCEAL5Q5H9L2 206 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 TJAP1Q5JTD0 557 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 SLC27A1Q6PCB7 646 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 DAW1Q8N136 415 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 SMG8Q8ND04 991 aaKnown RBP13.07□□□□□ -0.32
RFC4-202ENST00000392481 POF1BQ8WVV4 589 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 ASB2Q96Q27 587 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 PLIN2Q99541 437 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 EIF2AQ9BY44 585 aaKnown RBP13.07□□□□□ -0.32
RFC4-202ENST00000392481 CCDC113Q9H0I3 377 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 RSAD1Q9HA92 442 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 POLD4Q9HCU8 107 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 KCND2Q9NZV8 630 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 DAXXQ9UER7 740 aaPredicted RBP13.07□□□□□ -0.32
RFC4-202ENST00000392481 LZTS1Q9Y250 596 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 IPPQ9Y573 584 aa13.07□□□□□ -0.32
RFC4-202ENST00000392481 SRPRBQ9Y5M8 271 aaKnown RBP13.07□□□□□ -0.32
RFC4-202ENST00000392481 ACKR2O00590 384 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 NCK2O43639 380 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 HIP1RO75146 1068 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 SSBP05455 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
RFC4-202ENST00000392481 PRKCBP05771 671 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 PLA2G4BP0C869 781 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 ITGA4P13612 1032 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
RFC4-202ENST00000392481 ALDH7A1P49419 539 aaKnown RBP13.06□□□□□ -0.32
RFC4-202ENST00000392481 SLC12A3P55017 1021 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 PLCB3Q01970 1234 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 TFF2Q03403 129 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 MAPK7Q13164 816 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 COL19A1Q14993 1142 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 HACE1Q8IYU2 909 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 URGCPQ8TCY9 931 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 USP28Q96RU2 1077 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 TRIM6Q9C030 488 aaPredicted RBP13.06□□□□□ -0.32
RFC4-202ENST00000392481 CCSER1Q9C0I3 900 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 C17orf75Q9HAS0 396 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 TBC1D13Q9NVG8 400 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 SPG21Q9NZD8 308 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 KANSL3Q9P2N6 904 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 FBXO2Q9UK22 296 aaPredicted RBP13.06□□□□□ -0.32
RFC4-202ENST00000392481 INPP5FQ9Y2H2 1132 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 PLXNA4Q9HCM2 1894 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 SPTBN5Q9NRC6 3674 aaKnown RBP13.06□□□□□ -0.32
RFC4-202ENST00000392481 ATG2AQ2TAZ0 1938 aa13.06□□□□□ -0.32
RFC4-202ENST00000392481 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 CCDC169A6NNP5 214 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 N4BP3O15049 544 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 INPPL1O15357 1258 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 NPTX2P47972 431 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 PEX3P56589 373 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 BCAR1P56945 870 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 KRT17Q04695 432 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 RNASELQ05823 741 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 DMP1Q13316 513 aaPredicted RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 PRPF4BQ13523 1007 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 SLC39A14Q15043 492 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 PDE12Q6L8Q7 609 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 SYMPKQ92797 1274 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 PPP2R3CQ969Q6 453 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms