RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 KRT31Q15323 416 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 PLA2G4FQ68DD2 849 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 SWSAP1Q6NVH7 229 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 VSTM4Q8IW00 320 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 CCDC60Q8IWA6 550 aaPredicted RBP20.58■□□□□ 0.88
CCDC50-202ENST00000392456 CSGALNACT2Q8N6G5 542 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 EBF2Q9HAK2 575 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 GABBR1Q9UBS5 961 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 UBA1P22314 1058 aaKnown RBP20.57■□□□□ 0.88
CCDC50-202ENST00000392456 YWHABP31946 246 aaKnown RBP20.57■□□□□ 0.88
CCDC50-202ENST00000392456 RARRES1P49788 294 aa20.57■□□□□ 0.88
CCDC50-202ENST00000392456 NR1I3Q14994 352 aa20.57■□□□□ 0.88
CCDC50-202ENST00000392456 LY6KQ17RY6 165 aa20.57■□□□□ 0.88
CCDC50-202ENST00000392456 TCP11X2Q5H9J9 407 aa20.57■□□□□ 0.88
CCDC50-202ENST00000392456 MTHFD1LQ6UB35 978 aa20.57■□□□□ 0.88
CCDC50-202ENST00000392456 KCTD17Q8N5Z5 321 aa20.57■□□□□ 0.88
CCDC50-202ENST00000392456 NEK9Q8TD19 979 aa20.57■□□□□ 0.88
CCDC50-202ENST00000392456 NSMCE1Q8WV22 266 aa20.57■□□□□ 0.88
CCDC50-202ENST00000392456 CDHR1Q96JP9 859 aa20.57■□□□□ 0.88
CCDC50-202ENST00000392456 PAPOLBQ9NRJ5 636 aaKnown RBP20.57■□□□□ 0.88
CCDC50-202ENST00000392456 PASKQ96RG2 1323 aa20.57■□□□□ 0.88
CCDC50-202ENST00000392456 KCNJ18B7U540 433 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 HOXD13P35453 343 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 KCNA1Q09470 495 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 TUBB2AQ13885 445 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 KCNJ12Q14500 433 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 ANO5Q75V66 913 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 MYOCDQ8IZQ8 938 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 DAW1Q8N136 415 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 SENP7Q9BQF6 1050 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 TUBB2BQ9BVA1 445 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 IKZF4Q9H2S9 585 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 TCEAL9Q9UHQ7 104 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 NFASCO94856 1347 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 A0A1B0GTH6 734 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 ARHGEF35A5YM69 484 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 LINGO3P0C6S8 592 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 MYBP10242 640 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 SFNP31947 248 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 PSMC5P62195 406 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 GOLGA8FQ08AF8 430 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 GOLGA8DPQ0D2H9 430 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 IFFO1Q0D2I5 559 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 RNF187Q5TA31 235 aaPredicted RBP20.56■□□□□ 0.88
CCDC50-202ENST00000392456 PADI6Q6TGC4 694 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 ABHD15Q6UXT9 468 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 FBXO16Q8IX29 292 aaPredicted RBP20.56■□□□□ 0.88
CCDC50-202ENST00000392456 SHCBP1Q8NEM2 672 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 COG1Q8WTW3 980 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 VPS16Q9H269 839 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 MMADHCQ9H3L0 296 aaPredicted RBP20.56■□□□□ 0.88
CCDC50-202ENST00000392456 TAB2Q9NYJ8 693 aa20.56■□□□□ 0.88
CCDC50-202ENST00000392456 GOLGA6L7A0A1B0GV03 622 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 BACH1O14867 736 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 OPA1O60313 960 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 ADORA2AP29274 412 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 COPB2P35606 906 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 C4orf19Q8IY42 314 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 BICD1Q96G01 975 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 RBM41Q96IZ5 413 aaKnown RBP20.55■□□□□ 0.88
CCDC50-202ENST00000392456 CCDC114Q96M63 670 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 ACTR5Q9H9F9 607 aaPredicted RBP20.55■□□□□ 0.88
CCDC50-202ENST00000392456 MORF4L1Q9UBU8 362 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 CPA4Q9UI42 421 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 TRPM7Q96QT4 1865 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 LIN7AO14910 233 aaPredicted RBP20.55■□□□□ 0.88
CCDC50-202ENST00000392456 STBD1O95210 358 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 LYPLA2O95372 231 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 SKOR1P84550 965 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 MAPK7Q13164 816 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 SDCCAG8Q86SQ7 713 aaPredicted RBP20.55■□□□□ 0.88
CCDC50-202ENST00000392456 ZIC5Q96T25 663 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 PDGFCQ9NRA1 345 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 GGA2Q9UJY4 613 aa20.55■□□□□ 0.88
CCDC50-202ENST00000392456 LRRC10BA6NIK2 292 aa20.54■□□□□ 0.88
CCDC50-202ENST00000392456 A6NNZ2 444 aa20.54■□□□□ 0.88
CCDC50-202ENST00000392456 NMT1P30419 496 aaKnown RBP20.54■□□□□ 0.88
CCDC50-202ENST00000392456 TUBB8Q3ZCM7 444 aa20.54■□□□□ 0.88
CCDC50-202ENST00000392456 RGMBQ6NW40 437 aa20.54■□□□□ 0.88
CCDC50-202ENST00000392456 ZFAND2BQ8WV99 257 aa20.54■□□□□ 0.88
CCDC50-202ENST00000392456 FIZ1Q96SL8 496 aa20.54■□□□□ 0.88
CCDC50-202ENST00000392456 LIMA1Q9UHB6 759 aaKnown RBP20.54■□□□□ 0.88
CCDC50-202ENST00000392456 TBCAO75347 108 aaKnown RBP20.54■□□□□ 0.88
CCDC50-202ENST00000392456 KSR1Q8IVT5 923 aa20.54■□□□□ 0.88
CCDC50-202ENST00000392456 MYCT1Q8N699 235 aa20.54■□□□□ 0.88
CCDC50-202ENST00000392456 GTF3C2Q8WUA4 911 aaPredicted RBP20.54■□□□□ 0.88
CCDC50-202ENST00000392456 PARK7Q99497 189 aaKnown RBP20.54■□□□□ 0.88
CCDC50-202ENST00000392456 KCTD10Q9H3F6 313 aa20.54■□□□□ 0.88
CCDC50-202ENST00000392456 GPBP1L1Q9HC44 474 aaPredicted RBP20.54■□□□□ 0.88
CCDC50-202ENST00000392456 SYNGAP1Q96PV0 1343 aa20.54■□□□□ 0.88
CCDC50-202ENST00000392456 USO1O60763 962 aaKnown RBP20.53■□□□□ 0.88
CCDC50-202ENST00000392456 HIP1RO75146 1068 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 CCNA1P78396 465 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 ZCWPW2Q504Y3 356 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 ZC2HC1CQ53FD0 456 aaPredicted RBP20.53■□□□□ 0.88
CCDC50-202ENST00000392456 MFSD4BQ5TF39 518 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 NUP58Q9BVL2 599 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 IQCGQ9H095 443 aaKnown RBP20.53■□□□□ 0.88
CCDC50-202ENST00000392456 MRPL44Q9H9J2 332 aaKnown RBP20.53■□□□□ 0.88
CCDC50-202ENST00000392456 GPRC5CQ9NQ84 441 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms