RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 SPATA4Q8NEY3 305 aa23.07■■□□□ 1.28
SPTBN4-203ENST00000392023 PPP2R3BQ9Y5P8 575 aa23.07■■□□□ 1.28
SPTBN4-203ENST00000392023 SPATA31C2B4DYI2 1134 aa23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 MAPTP10636 758 aaKnown RBP23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 ABHD15Q6UXT9 468 aa23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 PALB2Q86YC2 1186 aa23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 ATP6V0A1Q93050 837 aa23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 LRRC1Q9BTT6 524 aa23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 XPNPEP1Q9NQW7 623 aa23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 PSD3Q9NYI0 1048 aa23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 CSADQ9Y600 493 aa23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 ABCB4P21439 1286 aa23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 MAP2K1Q02750 393 aaPredicted RBP23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 ACP6Q9NPH0 428 aa23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 TOPORSQ9NS56 1045 aaPredicted RBP23.06■■□□□ 1.28
SPTBN4-203ENST00000392023 OAS2P29728 719 aaKnown RBP23.05■■□□□ 1.28
SPTBN4-203ENST00000392023 USP8P40818 1118 aa23.05■■□□□ 1.28
SPTBN4-203ENST00000392023 STXBP2Q15833 593 aa23.05■■□□□ 1.28
SPTBN4-203ENST00000392023 GNPTABQ3T906 1256 aa23.05■■□□□ 1.28
SPTBN4-203ENST00000392023 TAS2R14Q9NYV8 317 aa23.05■■□□□ 1.28
SPTBN4-203ENST00000392023 MYBL2P10244 700 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 FERP16591 822 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 TCP1P17987 556 aaKnown RBP23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 ATP4AP20648 1035 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 SNRNP35Q16560 246 aaKnown RBP23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 SH3D19Q5HYK7 790 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 SLC39A4Q6P5W5 647 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 LBX2Q6XYB7 198 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 OLIG1Q8TAK6 271 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 TMEM143Q96AN5 459 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 SENP7Q9BQF6 1050 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 CYP26B1Q9NR63 512 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 ADARB2Q9NS39 739 aaKnown RBP23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 L1RE1Q9UN81 338 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 ALCAMQ13740 583 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 TTLL12Q14166 644 aaPredicted RBP23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 TTC31Q49AM3 519 aaPredicted RBP23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 UPF1Q92900 1129 aaKnown RBP eCLIP23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 TMEM117Q9H0C3 514 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 PCDHGC5Q9Y5F6 944 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 MYH9P35579 1960 aaKnown RBP23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 LCTP09848 1927 aa23.04■■□□□ 1.28
SPTBN4-203ENST00000392023 ERLIN1O75477 346 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 PRLRP16471 622 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 TUBB4BP68371 445 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 SLC20A1Q8WUM9 679 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 HNRNPLLQ8WVV9 542 aaKnown RBP23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 RBM12Q9NTZ6 932 aaKnown RBP23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 DMGDHQ9UI17 866 aaKnown RBP23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 SBF1O95248 1867 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 GALCP54803 685 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 SMC1AQ14683 1233 aaKnown RBP23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 MEI1Q5TIA1 1274 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 VPS36Q86VN1 386 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 POMGNT1Q8WZA1 660 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 EXOC4Q96A65 974 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 OSGEPQ9NPF4 335 aa23.03■■□□□ 1.28
SPTBN4-203ENST00000392023 MAGEA9P43362 315 aa23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 RDM1Q8NG50 284 aa23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 POLR3FQ9H1D9 316 aaPredicted RBP23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 ST6GALNAC4Q9H4F1 302 aa23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 PGK2P07205 417 aa23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 H2AFZP0C0S5 128 aa23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 DLATP10515 647 aaKnown RBP23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 H2AFVQ71UI9 128 aa23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 MAP4K3Q8IVH8 894 aa23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 SEMA4DQ92854 862 aa23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 BICD1Q96G01 975 aa23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 CHORDC1Q9UHD1 332 aaPredicted RBP23.02■■□□□ 1.28
SPTBN4-203ENST00000392023 HNRNPDLO14979 420 aaKnown RBP23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 ALDH5A1P51649 535 aaPredicted RBP23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 MYBPC2Q14324 1141 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 MIS18BP1Q6P0N0 1132 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 WDR93Q6P2C0 686 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 PACS2Q86VP3 889 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 SLC30A5Q8TAD4 765 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 CDHR1Q96JP9 859 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 RPGRIP1Q96KN7 1286 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 TIPINQ9BVW5 301 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 PDE11AQ9HCR9 933 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 SOWAHBA6NEL2 793 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 MAP2K7O14733 419 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 EIF3JO75822 258 aaKnown RBP23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 SUPT20HL2P0C7V6 817 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 PAFAH1B1P43034 410 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 MXI1P50539 228 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 LMBRD2Q68DH5 695 aaPredicted RBP23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 TAS1R3Q7RTX0 852 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 KIFAP3Q92845 792 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 SPATC1LQ9H0A9 340 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 PDLIM7Q9NR12 457 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 CENPFP49454 3210 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 WDR90Q96KV7 1748 aa23.01■■□□□ 1.27
SPTBN4-203ENST00000392023 LRRIQ3A6PVS8 624 aaPredicted RBP23■■□□□ 1.27
SPTBN4-203ENST00000392023 KCNK3O14649 394 aa23■■□□□ 1.27
SPTBN4-203ENST00000392023 N4BP1O75113 896 aaKnown RBP23■■□□□ 1.27
SPTBN4-203ENST00000392023 DGAT1O75907 488 aa23■■□□□ 1.27
SPTBN4-203ENST00000392023 EPC2Q52LR7 807 aa23■■□□□ 1.27
SPTBN4-203ENST00000392023 C12orf56Q8IXR9 622 aa23■■□□□ 1.27
SPTBN4-203ENST00000392023 PPM1KQ8N3J5 372 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms