RNA–Protein interactions for RNA: ENST00000391975.5

HDLBP-203, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 6,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-203ENST00000391975 RINT1Q6NUQ1 792 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 SH3GL3Q99963 347 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 CDC42BPGQ6DT37 1551 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 SYCE1LA8MT33 242 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 SCTRP47872 440 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 TBCCQ15814 346 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 TTI2Q6NXR4 508 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 TMED8Q6PL24 325 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-203ENST00000391975 RNF169Q8NCN4 708 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 GIPC2Q8TF65 315 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 PIK3R5Q8WYR1 880 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 LBHD1Q9BQE6 289 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-203ENST00000391975 ARHGAP20Q9P2F6 1191 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 DKC1O60832 514 aaKnown RBP eCLIP12.34□□□□□ -0.43
HDLBP-203ENST00000391975 GALCP54803 685 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 DCAF15Q66K64 600 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 SYT2Q8N9I0 419 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-203ENST00000391975 AENQ8WTP8 325 aaKnown RBP12.34□□□□□ -0.43
HDLBP-203ENST00000391975 ANO3Q9BYT9 981 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 SLC13A4Q9UKG4 626 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 TTLL1O95922 423 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 MRPS15P82914 257 aaKnown RBP12.34□□□□□ -0.43
HDLBP-203ENST00000391975 KNOP1Q1ED39 458 aaKnown RBP12.34□□□□□ -0.43
HDLBP-203ENST00000391975 XKR9Q5GH70 373 aa12.34□□□□□ -0.43
HDLBP-203ENST00000391975 A0A087X0T9 212 aa12.33□□□□□ -0.43
HDLBP-203ENST00000391975 PDE2AO00408 941 aaPredicted RBP12.33□□□□□ -0.43
HDLBP-203ENST00000391975 C21orf2O43822 256 aa12.33□□□□□ -0.43
HDLBP-203ENST00000391975 MMP10P09238 476 aa12.33□□□□□ -0.43
HDLBP-203ENST00000391975 FAM228BP0C875 321 aa12.33□□□□□ -0.43
HDLBP-203ENST00000391975 MYBL2P10244 700 aa12.33□□□□□ -0.43
HDLBP-203ENST00000391975 PLS3P13797 630 aa12.33□□□□□ -0.43
HDLBP-203ENST00000391975 GPC5P78333 572 aa12.33□□□□□ -0.43
HDLBP-203ENST00000391975 ICA1Q05084 483 aa12.33□□□□□ -0.43
HDLBP-203ENST00000391975 BBS9Q3SYG4 887 aa12.33□□□□□ -0.43
HDLBP-203ENST00000391975 BRINP3Q76B58 766 aa12.33□□□□□ -0.43
HDLBP-203ENST00000391975 USP17L15C9J2P7 530 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 USP17L13C9JLJ4 530 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 USP17L11C9JVI0 530 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 USP17L18D6R9N7 530 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 USP17L22D6RA61 530 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 USP17L17D6RBQ6 530 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 USP17L19D6RCP7 530 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 USP17L20D6RJB6 530 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 ORC4O43929 436 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 HSPA9P38646 679 aaKnown RBP12.33□□□□□ -0.44
HDLBP-203ENST00000391975 USP17L24Q0WX57 530 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 TROAPQ12815 778 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 DHX34Q14147 1143 aaKnown RBP12.33□□□□□ -0.44
HDLBP-203ENST00000391975 AOC3Q16853 763 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 TTBK2Q6IQ55 1244 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 USP17L6PQ6QN14 398 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 LRRC34Q8IZ02 419 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 DACH2Q96NX9 599 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 GPBP1L1Q9HC44 474 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-203ENST00000391975 DIABLOQ9NR28 239 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 ZFP69BQ9UJL9 534 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 FIS1Q9Y3D6 152 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 RASSF10A6NK89 507 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 ABL1P00519 1130 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 PYGBP11216 843 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 CTTNQ14247 550 aaKnown RBP12.33□□□□□ -0.44
HDLBP-203ENST00000391975 C2orf69Q8N8R5 385 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 TSEN2Q8NCE0 465 aaKnown RBP12.33□□□□□ -0.44
HDLBP-203ENST00000391975 PIGOQ8TEQ8 1089 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 A0A087X0B3 334 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 POTEFA5A3E0 1075 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 FTLP02792 175 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-203ENST00000391975 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 UCHL3P15374 230 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 KRT4P19013 534 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 SLC9A1P19634 815 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 TMEM139Q8IV31 216 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 FBXL16Q8N461 479 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 CALR3Q96L12 384 aaKnown RBP12.33□□□□□ -0.44
HDLBP-203ENST00000391975 A0A1B0GW55 424 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 IGF2BP3O00425 579 aaKnown RBP eCLIP12.33□□□□□ -0.442e-6■■■□□ 17.3
HDLBP-203ENST00000391975 DUX4L2P0CJ85 424 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 DUX4L3P0CJ86 424 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 DUX4L4P0CJ87 422 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 DUX4L5P0CJ88 424 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 DUX4L6P0CJ89 424 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 DUX4L7P0CJ90 424 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 USP11P51784 963 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 PDE1BQ01064 536 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 FOXD4Q12950 439 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-203ENST00000391975 C1orf54Q8WWF1 131 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 DYDC2Q96IM9 177 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 DUX4Q9UBX2 424 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 STRIP2Q9ULQ0 834 aa12.33□□□□□ -0.44
HDLBP-203ENST00000391975 PNMA6FA0A0J9YX94 578 aa12.32□□□□□ -0.44
HDLBP-203ENST00000391975 SCP2P22307 547 aa12.32□□□□□ -0.44
HDLBP-203ENST00000391975 NAALADL2Q58DX5 795 aa12.32□□□□□ -0.44
HDLBP-203ENST00000391975 SH3RF3Q8TEJ3 882 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-203ENST00000391975 CAVIN3Q969G5 261 aa12.32□□□□□ -0.44
HDLBP-203ENST00000391975 COG4Q9H9E3 785 aa12.32□□□□□ -0.44
HDLBP-203ENST00000391975 DONSONQ9NYP3 566 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms