RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 HIBADHP31937 336 aaKnown RBP5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 NPEPPSP55786 919 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 LGALS4P56470 323 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 MRPS9P82933 396 aaKnown RBP5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 MGAT5Q09328 741 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 SPDYAQ5MJ70 313 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 MFSD5Q6N075 450 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 LHFPL2Q6ZUX7 228 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 SGMS1Q86VZ5 419 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 ATL2Q8NHH9 583 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 EAF2Q96CJ1 260 aaPredicted RBP5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 FAM126AQ9BYI3 521 aaPredicted RBP5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 ENKD1Q9H0I2 346 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 PRDM12Q9H4Q4 367 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 VTA1Q9NP79 307 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 TLR9Q9NR96 1032 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 ING3Q9NXR8 418 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 SH3BP1Q9Y3L3 701 aa5.06□□□□□ -1.6
SNORA40.3-201ENST00000390964 MATN3O15232 486 aa5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 PRKD3O94806 890 aa5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 LTA4HP09960 611 aaKnown RBP5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 MTHFD2P13995 350 aa5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 ACRV1P26436 265 aa5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 PUM1Q14671 1186 aaKnown RBP eCLIP5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 C19orf54Q5BKX5 351 aa5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 FKBP15Q5T1M5 1219 aa5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 SPTY2D1Q68D10 685 aaPredicted RBP5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 THEMISQ8N1K5 641 aaPredicted RBP5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 MIEF2Q96C03 454 aa5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 AHCYL2Q96HN2 611 aaKnown RBP5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 AURKAIP1Q9NWT8 199 aaPredicted RBP5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 NCDNQ9UBB6 729 aa5.05□□□□□ -1.6
SNORA40.3-201ENST00000390964 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 CAPN14A8MX76 684 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 TNFRSF1AP19438 455 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 UBE3CQ15386 1083 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 SPRED1Q7Z699 444 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 DDX42Q86XP3 938 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 CMIPQ8IY22 773 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 MSL3Q8N5Y2 521 aaKnown RBP5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 AUTS2Q8WXX7 1259 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 ARL8AQ96BM9 186 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 ZNF512Q96ME7 567 aaPredicted RBP5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 C14orf119Q9NWQ9 140 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 DPP7Q9UHL4 492 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 ATP8A1Q9Y2Q0 1164 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 GIT1Q9Y2X7 761 aa5.04□□□□□ -1.6
SNORA40.3-201ENST00000390964 MFAP3LO75121 409 aa5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 GYPEP15421 78 aa5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 SCAND1P57086 179 aa5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 ERVK-21P61565 698 aa5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 ELAVL1Q15717 326 aaKnown RBP5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 ANO4Q32M45 955 aa5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 USP39Q53GS9 565 aaKnown RBP5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 KCNK18Q7Z418 384 aa5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 NECAB2Q7Z6G3 386 aa5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 SNX33Q8WV41 574 aa5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 PUS7LQ9H0K6 701 aaKnown RBP5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 EDARQ9UNE0 448 aa5.03□□□□□ -1.6
SNORA40.3-201ENST00000390964 PLSCR1O15162 318 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 HOXA3O43365 443 aaPredicted RBP5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 PHF2O75151 1096 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 TMEM127O75204 238 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 IPO13O94829 963 aaKnown RBP5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 CTSSP25774 331 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 GPR3P46089 330 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 DUSP2Q05923 314 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 MUM1Q2TAK8 710 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 METTL24Q5JXM2 366 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 GJC2Q5T442 439 aaPredicted RBP5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 BTNL9Q6UXG8 535 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 RNF207Q6ZRF8 634 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 ZNF662Q6ZS27 426 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 APBB1IPQ7Z5R6 666 aaPredicted RBP5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 GSPT2Q8IYD1 628 aaKnown RBP5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 MDGA1Q8NFP4 955 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 OR5M3Q8NGP4 307 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 COG1Q8WTW3 980 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 TGFBRAP1Q8WUH2 860 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 EXTL1Q92935 676 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 FATE1Q969F0 183 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 PDCD2LQ9BRP1 358 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 MENTQ9BUN1 341 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 ZNF703Q9H7S9 590 aaPredicted RBP5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 SLC5A4Q9NY91 659 aa5.02□□□□□ -1.61
SNORA40.3-201ENST00000390964 WASHC2AQ641Q2 1341 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 RPTORQ8N122 1335 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 PRAMEF4O60810 478 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 GASTP01350 101 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 GNAT2P19087 354 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 CASRP41180 1078 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 GZMKP49863 264 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 CDK17Q00537 523 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 MRPL49Q13405 166 aaKnown RBP5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 FOXE3Q13461 319 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 NRN1LQ496H8 165 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 MIIPQ5JXC2 388 aa5.01□□□□□ -1.61
SNORA40.3-201ENST00000390964 ABHD15Q6UXT9 468 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms