RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 AK8Q96MA6 479 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 CCDC113Q9H0I3 377 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 CSRNP2Q9H175 543 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 LZTS1Q9Y250 596 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 MORC2Q9Y6X9 1032 aaPredicted RBP12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 VWA3AA6NCI4 1184 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 FSCN2O14926 492 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 B4GALT5O43286 388 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 ERLIN2O94905 339 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 IRS1P35568 1242 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 NAMPTP43490 491 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 HYAL1Q12794 435 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 MAPK7Q13164 816 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 SF3A1Q15459 793 aaKnown RBP12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 SKIV2LQ15477 1246 aaKnown RBP12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 TMEM119Q4V9L6 283 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 NOMO2Q5JPE7 1267 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 RINT1Q6NUQ1 792 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 NOTUMQ6P988 496 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 ABI1Q8IZP0 508 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 SLC39A11Q8N1S5 342 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 RNF169Q8NCN4 708 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 KIFAP3Q92845 792 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 PGBD4Q96DM1 585 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 PRIMPOLQ96LW4 560 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 EIF2AQ9BY44 585 aaKnown RBP12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 MRPL9Q9BYD2 267 aaKnown RBP12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 UBE2ZQ9H832 354 aaPredicted RBP12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 TBC1D13Q9NVG8 400 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 CNTNAP2Q9UHC6 1331 aa12.61□□□□□ -0.39
IGHV4-28-201ENST00000390612 LRRIQ4A6NIV6 560 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 TTLL13PA6NNM8 815 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 NCK2O43639 380 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 B4GALT3O60512 393 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 EDN1P05305 212 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 GUCY2CP25092 1073 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 LONP1P36776 959 aaKnown RBP12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 LTBRP36941 435 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 AFF1P51825 1210 aaKnown RBP12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 SLC12A3P55017 1021 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 ERVFC1P60507 584 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 GRIN1Q05586 938 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 AAK1Q2M2I8 961 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 SPOUT1Q5T280 376 aaKnown RBP12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 GLB1LQ6UWU2 654 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 SYT2Q8N9I0 419 aaPredicted RBP12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 LRRC15Q8TF66 581 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 MRPS27Q92552 414 aaKnown RBP12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 SYMPKQ92797 1274 aaKnown RBP12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 PABPC5Q96DU9 382 aaKnown RBP12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 CPB2Q96IY4 423 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 ZNF558Q96NG5 402 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 RUSC1Q9BVN2 902 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 NT5C3AQ9H0P0 336 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 C2orf40Q9H1Z8 148 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 RNF39Q9H2S5 420 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 NRDE2Q9H7Z3 1164 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 POLD4Q9HCU8 107 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 PRMT7Q9NVM4 692 aaPredicted RBP12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 SPG21Q9NZD8 308 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 IPPQ9Y573 584 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 CLIC4Q9Y696 253 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 TCHHQ07283 1943 aa12.6□□□□□ -0.39
IGHV4-28-201ENST00000390612 ZMYM2Q9UBW7 1377 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 ACKR2O00590 384 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 STX6O43752 255 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 PPM1AP35813 382 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 PBX3P40426 434 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 KCNQ1P51787 676 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 BCAR1P56945 870 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 NCBP1Q09161 790 aaKnown RBP12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 ADAM15Q13444 863 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 PPP2R5AQ15172 486 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 LEXMQ3ZCV2 418 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 LONRF3Q496Y0 759 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 PDE12Q6L8Q7 609 aaKnown RBP12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 SLC27A1Q6PCB7 646 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 ADGRD2Q7Z7M1 963 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 CABP7Q86V35 215 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 ZBTB8OSQ8IWT0 167 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 NTPCRQ9BSD7 190 aaKnown RBP12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 TIPINQ9BVW5 301 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 CCSER1Q9C0I3 900 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 RSAD1Q9HA92 442 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 UBN1Q9NPG3 1134 aa12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
IGHV4-28-201ENST00000390612 CARNS1A5YM72 827 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 HIP1RO75146 1068 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 DDHD2O94830 711 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 GALTP07902 379 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 ITGA4P13612 1032 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 EFNA5P52803 228 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 PDCD11Q14690 1871 aaKnown RBP12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 MAPK6Q16659 721 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 ARSHQ5FYA8 562 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 NT5DC1Q5TFE4 455 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 TMEM173Q86WV6 379 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms