RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 SLC7A3Q8WY07 619 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 RSPH1Q8WYR4 309 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 PPME1Q9Y570 386 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 MYO15AQ9UKN7 3530 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 C2CD4DB7Z1M9 353 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 DKC1O60832 514 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAV3-201ENST00000390425 DDHD2O94830 711 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 SLITRK3O94933 977 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 CXCL14O95715 111 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 SRGAP2CP0DJJ0 459 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 VCPP55072 806 aaKnown RBP12.33□□□□□ -0.44
TRAV3-201ENST00000390425 ANAPC15P60006 121 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 ST3GAL1Q11201 340 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 PTPN14Q15678 1187 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 ME3Q16798 604 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 XKR9Q5GH70 373 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 SRGAP1Q7Z6B7 1085 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 FERMT3Q86UX7 667 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 C12orf76Q8N812 135 aaPredicted RBP12.33□□□□□ -0.44
TRAV3-201ENST00000390425 RNF149Q8NC42 400 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 SMG8Q8ND04 991 aaKnown RBP12.33□□□□□ -0.44
TRAV3-201ENST00000390425 GTF3C6Q969F1 213 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 PBXIP1Q96AQ6 731 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 GBP3Q9H0R5 595 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 ADAM7Q9H2U9 754 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 VWA8A3KMH1 1905 aa12.33□□□□□ -0.44
TRAV3-201ENST00000390425 TSPAN1O60635 241 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 PDGFBP01127 241 aaPredicted RBP12.32□□□□□ -0.44
TRAV3-201ENST00000390425 XBP1P17861 261 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 CA8P35219 290 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 KRT2P35908 639 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 MRE11P49959 708 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 RNASELQ05823 741 aaKnown RBP12.32□□□□□ -0.44
TRAV3-201ENST00000390425 ITIH3Q06033 890 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 RARS2Q5T160 578 aaKnown RBP12.32□□□□□ -0.44
TRAV3-201ENST00000390425 KIAA1841Q6NSI8 718 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 FBXL6Q8N531 539 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 NSUN7Q8NE18 718 aaKnown RBP12.32□□□□□ -0.44
TRAV3-201ENST00000390425 PGBD4Q96DM1 585 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 PHOX2BQ99453 314 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 NAP1L4Q99733 375 aaKnown RBP12.32□□□□□ -0.44
TRAV3-201ENST00000390425 EIF2AQ9BY44 585 aaKnown RBP12.32□□□□□ -0.44
TRAV3-201ENST00000390425 SMOC2Q9H3U7 446 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 ZSWIM4Q9H7M6 989 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 RSAD1Q9HA92 442 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 MARCH5Q9NX47 278 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 CNTNAP2Q9UHC6 1331 aa12.32□□□□□ -0.44
TRAV3-201ENST00000390425 DMDP11532 3685 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 INPPL1O15357 1258 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 GAS2O43903 313 aaKnown RBP12.31□□□□□ -0.44
TRAV3-201ENST00000390425 JAK2O60674 1132 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 LILRB3O75022 631 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 LYPLA2O95372 231 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 EFEMP2O95967 443 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 NCLP19338 710 aaKnown RBP12.31□□□□□ -0.44
TRAV3-201ENST00000390425 PTENP60484 403 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 TCF15Q12870 199 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 CAPSQ13938 189 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 AMHR2Q16671 573 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 CES5AQ6NT32 575 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
TRAV3-201ENST00000390425 SLFN12Q8IYM2 578 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 URGCPQ8TCY9 931 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 ASAP3Q8TDY4 903 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 NECTIN4Q96NY8 510 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 MTRQ99707 1265 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 HSD17B14Q9BPX1 270 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
TRAV3-201ENST00000390425 TMEM175Q9BSA9 504 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 RNF39Q9H2S5 420 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 TSHZ2Q9NRE2 1034 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 DZANK1Q9NVP4 752 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 IPPQ9Y573 584 aa12.31□□□□□ -0.44
TRAV3-201ENST00000390425 CARNS1A5YM72 827 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 BTBD18B2RXH4 712 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 F8W810 466 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 ASAP2O43150 1006 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 MARCH6O60337 910 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 BRD1O95696 1058 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 POMCP01189 267 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 ASGR2P07307 311 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 CNPP09543 421 aaKnown RBP12.3□□□□□ -0.44
TRAV3-201ENST00000390425 MTHFRP42898 656 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 FOSBP53539 338 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 MBTD1Q05BQ5 628 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 ANKRD1Q15327 319 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 OTUD6AQ7L8S5 288 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 TPH2Q8IWU9 490 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 SUGP1Q8IWZ8 645 aaKnown RBP12.3□□□□□ -0.44
TRAV3-201ENST00000390425 DIS3L2Q8IYB7 885 aaKnown RBP12.3□□□□□ -0.44
TRAV3-201ENST00000390425 EXOC8Q8IYI6 725 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 RNF168Q8IYW5 571 aaPredicted RBP12.3□□□□□ -0.44
TRAV3-201ENST00000390425 KREMEN2Q8NCW0 462 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 WASF1Q92558 559 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 CPB2Q96IY4 423 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 KLHL5Q96PQ7 755 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 MTMR9Q96QG7 549 aa12.3□□□□□ -0.44
TRAV3-201ENST00000390425 NR2E1Q9Y466 385 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms