RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 AGMOQ6ZNB7 445 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 RHPN2Q8IUC4 686 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 RSPH1Q8WYR4 309 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 SH2D3AQ9BRG2 576 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 HERC2P3Q9BVR0 1158 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 INO80BQ9C086 356 aaPredicted RBP10.87□□□□□ -0.67
IFT88-203ENST00000389373 NT5C3AQ9H0P0 336 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 SLC2A4RGQ9NR83 387 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.87□□□□□ -0.67
IFT88-203ENST00000389373 GMEB2Q9UKD1 530 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 FBXO4Q9UKT5 387 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 SSX2IPQ9Y2D8 614 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 PCDHB2Q9Y5E7 798 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 RBM8AQ9Y5S9 174 aaKnown RBP10.87□□□□□ -0.67
IFT88-203ENST00000389373 C2orf16Q68DN1 1984 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 IGLV3-22A0A075B6J6 115 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 WDR64B1ANS9 1081 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 ANHXE9PGG2 379 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 FSHRP23945 695 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 CHMLP26374 656 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 GLUD2P49448 558 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 CLK2P49760 499 aaKnown RBP10.86□□□□□ -0.67
IFT88-203ENST00000389373 DNM2P50570 870 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 RAB27AP51159 221 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 COL9A3Q14050 684 aaPredicted RBP10.86□□□□□ -0.67
IFT88-203ENST00000389373 MLF2Q15773 248 aaPredicted RBP10.86□□□□□ -0.67
IFT88-203ENST00000389373 LPAL2Q16609 132 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 UGCGQ16739 394 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 SLC44A4Q53GD3 710 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 PRR16Q569H4 304 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 PPM1JQ5JR12 505 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 PPP1R18Q6NYC8 613 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 PARM1Q6UWI2 310 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 ZNF707Q96C28 371 aaPredicted RBP10.86□□□□□ -0.67
IFT88-203ENST00000389373 BORCS6Q96GS4 357 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 NLRP4Q96MN2 994 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 TMEM175Q9BSA9 504 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 RSAD1Q9HA92 442 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 DISC1Q9NRI5 854 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 ZSCAN32Q9NX65 697 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 KANSL3Q9P2N6 904 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 SUCLA2Q9P2R7 463 aaPredicted RBP10.86□□□□□ -0.67
IFT88-203ENST00000389373 SEPT9Q9UHD8 586 aaPredicted RBP10.86□□□□□ -0.67
IFT88-203ENST00000389373 PCDHGA2Q9Y5H1 932 aa10.86□□□□□ -0.67
IFT88-203ENST00000389373 CNTNAP5Q8WYK1 1306 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 TMEM150BA6NC51 233 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 ZNF623O75123 536 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 CYP3A4P08684 503 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 LIFRP42702 1097 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 CDC42EP1Q00587 391 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 SETQ01105 290 aaPredicted RBP10.85□□□□□ -0.67
IFT88-203ENST00000389373 SPEM2Q0P670 501 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 GRASPQ7Z6J2 395 aaPredicted RBP10.85□□□□□ -0.67
IFT88-203ENST00000389373 KSR1Q8IVT5 923 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 FGF14Q92915 247 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 B3GALT6Q96L58 329 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 MTA3Q9BTC8 594 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 TRAIPQ9BWF2 469 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 PRKD2Q9BZL6 878 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 GLT8D2Q9H1C3 349 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 PLEKHA4Q9H4M7 779 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 PARD6AQ9NPB6 346 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 BARHL2Q9NY43 387 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 RAB23Q9ULC3 237 aa10.85□□□□□ -0.67
IFT88-203ENST00000389373 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.85□□□□□ -0.67
IFT88-203ENST00000389373 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.84□□□□□ -0.67
IFT88-203ENST00000389373 TGM5O43548 720 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 TBC1D4O60343 1298 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 GSPT1P15170 499 aaKnown RBP10.84□□□□□ -0.67
IFT88-203ENST00000389373 RPL17P18621 184 aaKnown RBP10.84□□□□□ -0.67
IFT88-203ENST00000389373 NTHL1P78549 312 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 PRKCQQ04759 706 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 ZBTB41Q5SVQ8 909 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 TTC22Q5TAA0 569 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 ZBTB44Q8NCP5 570 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 HDAC7Q8WUI4 952 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 MAP4K1Q92918 833 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 RHOBTB2Q9BYZ6 727 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 EPC1Q9H2F5 836 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 RXFP1Q9HBX9 757 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 LTB4R2Q9NPC1 389 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 RBM28Q9NW13 759 aaKnown RBP10.84□□□□□ -0.67
IFT88-203ENST00000389373 MARCH5Q9NX47 278 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 ZDHHC7Q9NXF8 308 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 NAP1L2Q9ULW6 460 aaPredicted RBP10.84□□□□□ -0.67
IFT88-203ENST00000389373 POLIQ9UNA4 740 aa10.84□□□□□ -0.67
IFT88-203ENST00000389373 DDX11L8A8MPP1 907 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 F8W810 466 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 ADAMTS3O15072 1205 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 NCAM2O15394 837 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 SGSM2O43147 1006 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 GAS7O60861 476 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 ITGA4P13612 1032 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 TGM1P22735 817 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 DSG1Q02413 1049 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 TARBP2Q15633 366 aaKnown RBP10.83□□□□□ -0.68
IFT88-203ENST00000389373 RTN1Q16799 776 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 PRR23BQ6ZRT6 265 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 TPRG1Q6ZUI0 275 aa10.83□□□□□ -0.68
IFT88-203ENST00000389373 ZNF410Q86VK4 478 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms