RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 PCBP1Q15365 356 aaKnown RBP eCLIP19.99■□□□□ 0.796e-7■■■■□ 21.6
RPUSD3-201ENST00000383820 PTPN14Q15678 1187 aa19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 OTUD6AQ7L8S5 288 aa19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 CABP7Q86V35 215 aa19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 ZNF280BQ86YH2 543 aa19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 C12orf76Q8N812 135 aaPredicted RBP19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 CNNM3Q8NE01 707 aa19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 LARP6Q9BRS8 491 aaKnown RBP19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 EMILIN2Q9BXX0 1053 aa19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 GBP3Q9H0R5 595 aa19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 RSAD1Q9HA92 442 aa19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 DBR1Q9UK59 544 aaKnown RBP19.99■□□□□ 0.79
RPUSD3-201ENST00000383820 MYO10Q9HD67 2058 aa19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 BRD1O95696 1058 aa19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 ALDH2P05091 517 aa19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 HOXA11P31270 313 aaPredicted RBP19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 LAMTOR4Q0VGL1 99 aa19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 ZNF579Q8NAF0 562 aaKnown RBP19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 LXNQ9BS40 222 aa19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 VN1R3Q9BXE9 311 aa19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 SFXN1Q9H9B4 322 aa19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 UBN1Q9NPG3 1134 aa19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 WRAP73Q9P2S5 460 aaPredicted RBP19.98■□□□□ 0.79
RPUSD3-201ENST00000383820 DENND4AQ7Z401 1863 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 B4GALT3O60512 393 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 CCNT1O60563 726 aaKnown RBP19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 DDHD2O94830 711 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 PDGFBP01127 241 aaPredicted RBP19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 WEE2P0C1S8 567 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 SRGAP2CP0DJJ0 459 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 NCLP19338 710 aaKnown RBP19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 YWHABP31946 246 aaKnown RBP19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 SCRN1Q12765 414 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 UBXN11Q5T124 520 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 GPR149Q86SP6 731 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 SLFN12Q8IYM2 578 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 HAS1Q92839 578 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 TMEM143Q96AN5 459 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 FAM193BQ96PV7 902 aaPredicted RBP19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 ZSWIM4Q9H7M6 989 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 MINDY3Q9H8M7 445 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 FAN1Q9Y2M0 1017 aa19.97■□□□□ 0.79
RPUSD3-201ENST00000383820 ST18O60284 1047 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 MARCH6O60337 910 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 LILRB3O75022 631 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 AXLP30530 894 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 CLCN4P51793 760 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 EMC2Q15006 297 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 FERMT3Q86UX7 667 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 RNF149Q8NC42 400 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 ACSF2Q96CM8 615 aaPredicted RBP19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 CCDC51Q96ER9 411 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 KLHL5Q96PQ7 755 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 MRPL17Q9NRX2 175 aaKnown RBP19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 LIMD1Q9UGP4 676 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 SSX2IPQ9Y2D8 614 aa19.96■□□□□ 0.79
RPUSD3-201ENST00000383820 ARID2Q68CP9 1835 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 NRP1O14786 923 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 INPPL1O15357 1258 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 GALR2O43603 387 aaPredicted RBP19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 ERLIN2O94905 339 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 BAG4O95429 457 aaKnown RBP19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 KLRC2P26717 231 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 SPIRE1Q08AE8 756 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 MXD4Q14582 209 aaPredicted RBP19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 XKR9Q5GH70 373 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 KANK3Q6NY19 840 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 TMC5Q6UXY8 1006 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 C15orf39Q6ZRI6 1047 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 PIK3AP1Q6ZUJ8 805 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 MTRQ99707 1265 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 RGL1Q9NZL6 768 aa19.95■□□□□ 0.78
RPUSD3-201ENST00000383820 PFKFB2O60825 505 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 SOD2P04179 222 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 ASGR2P07307 311 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 CNPP09543 421 aaKnown RBP19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 ITGA4P13612 1032 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 AFF1P51825 1210 aaKnown RBP19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 POU5F1BQ06416 359 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 NCBP1Q09161 790 aaKnown RBP19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 NCAPH2Q6IBW4 605 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 CCDC149Q6ZUS6 474 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 OTOP3Q7RTS5 596 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 POTEDQ86YR6 584 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 IFNLR1Q8IU57 520 aaPredicted RBP19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 WASF1Q92558 559 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 ATOH1Q92858 354 aaPredicted RBP19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 DYDC2Q96IM9 177 aa19.94■□□□□ 0.78
RPUSD3-201ENST00000383820 CACNA1HO95180 2353 aa19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 SPDYE4A6NLX3 237 aa19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 LYPLA2O95372 231 aa19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 POMCP01189 267 aa19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 URODP06132 367 aa19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 PTENP60484 403 aa19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 TFDP1Q14186 410 aa19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 NOTUMQ6P988 496 aa19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 CYP26C1Q6V0L0 522 aa19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 SMG8Q8ND04 991 aaKnown RBP19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 CMASQ8NFW8 434 aaPredicted RBP19.93■□□□□ 0.78
RPUSD3-201ENST00000383820 OXER1Q8TDS5 423 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms