RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 VAT1LQ9HCJ6 419 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 DNAJC17Q9NVM6 304 aaKnown RBP16.09■□□□□ 0.17
CTNS-202ENST00000381870 TBK1Q9UHD2 729 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 PCYOX1Q9UHG3 505 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 SCOCQ9UIL1 159 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 TCRBV7S2A1N4TA0A589 114 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 PALM3A6NDB9 673 aaPredicted RBP16.09■□□□□ 0.17
CTNS-202ENST00000381870 KLRF2D3W0D1 207 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 STARD3NLO95772 234 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 KCNJ1P48048 391 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 WASHC2DQ5SRD0 308 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 TCERG1LQ5VWI1 586 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 ZC3H3Q8IXZ2 948 aaKnown RBP16.09■□□□□ 0.17
CTNS-202ENST00000381870 CTNNBL1Q8WYA6 563 aaPredicted RBP16.09■□□□□ 0.17
CTNS-202ENST00000381870 BICD1Q96G01 975 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 UIMC1Q96RL1 719 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 THAP2Q9H0W7 228 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 ZHX3Q9H4I2 956 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 OCEL1Q9H607 264 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 AAASQ9NRG9 546 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 USP40Q9NVE5 1235 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 ATP8B3O60423 1300 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 E9PMD0 336 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 ATP5HO75947 161 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 TMEM253P0C7T8 217 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 ANXA13P27216 316 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 GNA11P29992 359 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 CASP5P51878 434 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 CTTNQ14247 550 aaKnown RBP16.08■□□□□ 0.17
CTNS-202ENST00000381870 KHDC1Q4VXA5 237 aaKnown RBP16.08■□□□□ 0.17
CTNS-202ENST00000381870 LRRC23Q53EV4 343 aaPredicted RBP16.08■□□□□ 0.17
CTNS-202ENST00000381870 RFWD3Q6PCD5 774 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 TRIM74Q86UV6 250 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 TRIM73Q86UV7 250 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 CCNJLQ8IV13 435 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 REXO1Q8N1G1 1221 aaKnown RBP16.08■□□□□ 0.17
CTNS-202ENST00000381870 SPOCK2Q92563 424 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 INPP5DQ92835 1189 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 LRRC37BQ96QE4 947 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 PAIP2Q9BPZ3 127 aaKnown RBP16.08■□□□□ 0.17
CTNS-202ENST00000381870 NT5C3AQ9H0P0 336 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 MCM9Q9NXL9 1143 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 TAS2R14Q9NYV8 317 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 USP20Q9Y2K6 914 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.17
CTNS-202ENST00000381870 ZNF804BA4D1E1 1349 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 ATP9AO75110 1047 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 ALAS1P13196 640 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 CTNNA2P26232 953 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 CHKAP35790 457 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 ZC2HC1CQ53FD0 456 aaPredicted RBP16.08■□□□□ 0.16
CTNS-202ENST00000381870 SRRM1Q8IYB3 904 aaKnown RBP16.08■□□□□ 0.16
CTNS-202ENST00000381870 CCDC105Q8IYK2 499 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 ATL2Q8NHH9 583 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 LRRC8CQ8TDW0 803 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 MAIP1Q8WWC4 291 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 NRG4Q8WWG1 115 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 TRAPPC9Q96Q05 1148 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 CRNKL1Q9BZJ0 848 aaKnown RBP16.08■□□□□ 0.16
CTNS-202ENST00000381870 STX8Q9UNK0 236 aa16.08■□□□□ 0.16
CTNS-202ENST00000381870 SLIT2O94813 1529 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 CETPP11597 493 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 HOXA7P31268 230 aaPredicted RBP16.07■□□□□ 0.16
CTNS-202ENST00000381870 CACNA2D1P54289 1103 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
CTNS-202ENST00000381870 TRMT10CQ7L0Y3 403 aaKnown RBP16.07■□□□□ 0.16
CTNS-202ENST00000381870 KLHL23Q8NBE8 558 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 NSUN4Q96CB9 384 aaKnown RBP16.07■□□□□ 0.16
CTNS-202ENST00000381870 METTL5Q9NRN9 209 aaKnown RBP16.07■□□□□ 0.16
CTNS-202ENST00000381870 TMOD3Q9NYL9 352 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 GCNT4Q9P109 453 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 LRCH1Q9Y2L9 728 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 ALG6Q9Y672 507 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 NHSL1Q5SYE7 1610 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 ROBO1Q9Y6N7 1651 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 TMEM110-MUSTN1A8MSY1 372 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 EYA4O95677 639 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 XRCC5P13010 732 aaKnown RBP16.07■□□□□ 0.16
CTNS-202ENST00000381870 KCNA3P22001 575 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 VHLP40337 213 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 YARSP54577 528 aaKnown RBP16.07■□□□□ 0.16
CTNS-202ENST00000381870 MECOMQ03112 1051 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 DNAJC3Q13217 504 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 PDIA5Q14554 519 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 SUSD4Q5VX71 490 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 ARHGEF18Q6ZSZ5 1173 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 PALB2Q86YC2 1186 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 KSR1Q8IVT5 923 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 CCDC65Q8IXS2 484 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 ZNF526Q8TF50 670 aaPredicted RBP16.07■□□□□ 0.16
CTNS-202ENST00000381870 SCG3Q8WXD2 468 aaKnown RBP16.07■□□□□ 0.16
CTNS-202ENST00000381870 GRAMD1AQ96CP6 724 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 TMEM47Q9BQJ4 181 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 RAB34Q9BZG1 259 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 DCLRE1BQ9H816 532 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 BMP2KQ9NSY1 1161 aaPredicted RBP16.07■□□□□ 0.16
CTNS-202ENST00000381870 NKIRAS1Q9NYS0 192 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 CTTNBP2NLQ9P2B4 639 aa16.07■□□□□ 0.16
CTNS-202ENST00000381870 TP73O15350 636 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 ADAMTS2O95450 1211 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms