RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ERVK-21P61565 698 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 HTRA4P83105 476 aaPredicted RBP17.84■□□□□ 0.45
SNRPB-201ENST00000381342 AMHR2Q16671 573 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 CCDC113Q9H0I3 377 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 C2orf40Q9H1Z8 148 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 TNMDQ9H2S6 317 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 ZHX3Q9H4I2 956 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 AGPAT5Q9NUQ2 364 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 LRFN2Q9ULH4 789 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 PHLPP2Q6ZVD8 1323 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 B4GALT5O43286 388 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 ACTN4O43707 911 aaKnown RBP17.83■□□□□ 0.44
SNRPB-201ENST00000381342 EDN1P05305 212 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 ZNF131P52739 623 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 GRAMD1CQ8IYS0 662 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 FIBCD1Q8N539 461 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 FBXO22Q8NEZ5 403 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 DNAJC19Q96DA6 116 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 CPB2Q96IY4 423 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 C17orf75Q9HAS0 396 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 KMT5AQ9NQR1 393 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 RGS18Q9NS28 235 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 KBTBD4Q9NVX7 518 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 SERTAD1Q9UHV2 236 aa17.83■□□□□ 0.44
SNRPB-201ENST00000381342 KIAA1671Q9BY89 1806 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-201ENST00000381342 FAM237AA0A1B0GTK4 181 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 GOLGA6L4A6NEF3 574 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 SLC16A4O15374 487 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 ARHGEF15O94989 841 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 PRKCBP05771 671 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 ZSCAN20P17040 1043 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-201ENST00000381342 POU3F3P20264 500 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-201ENST00000381342 SYKP43405 635 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 CEP57L1Q8IYX8 460 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 MYCT1Q8N699 235 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 PYM1Q9BRP8 204 aaKnown RBP17.82■□□□□ 0.44
SNRPB-201ENST00000381342 MAGEF1Q9HAY2 307 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 PARVGQ9HBI0 331 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 LMCD1Q9NZU5 365 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 LARSQ9P2J5 1176 aaKnown RBP17.82■□□□□ 0.44
SNRPB-201ENST00000381342 ARHGAP28Q9P2N2 729 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 THEGQ9P2T0 379 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 RWDD3Q9Y3V2 267 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 MTCH2Q9Y6C9 303 aa17.82■□□□□ 0.44
SNRPB-201ENST00000381342 FNDC1Q4ZHG4 1894 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-201ENST00000381342 CNTNAP2Q9UHC6 1331 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 TTLL13PA6NNM8 815 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 C9IYK1 514 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 SLFN14P0C7P3 912 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 IDEP14735 1019 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 ARF4P18085 180 aaPredicted RBP17.81■□□□□ 0.44
SNRPB-201ENST00000381342 CASP1P29466 404 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 HOXA11P31270 313 aaPredicted RBP17.81■□□□□ 0.44
SNRPB-201ENST00000381342 AFMP43652 599 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 SARSP49591 514 aaKnown RBP17.81■□□□□ 0.44
SNRPB-201ENST00000381342 EFNA5P52803 228 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 MAPK6Q16659 721 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 CSPP1Q1MSJ5 1256 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 LONRF3Q496Y0 759 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 TWF2Q6IBS0 349 aaKnown RBP17.81■□□□□ 0.44
SNRPB-201ENST00000381342 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 TAS1R3Q7RTX0 852 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 SFR1Q86XK3 245 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 SP7Q8TDD2 431 aaPredicted RBP17.81■□□□□ 0.44
SNRPB-201ENST00000381342 SPIRE2Q8WWL2 714 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 TRIM9Q9C026 710 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 FZD8Q9H461 694 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 C1orf112Q9NSG2 853 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 PRMT7Q9NVM4 692 aaPredicted RBP17.81■□□□□ 0.44
SNRPB-201ENST00000381342 USP20Q9Y2K6 914 aa17.81■□□□□ 0.44
SNRPB-201ENST00000381342 NLRC5Q86WI3 1866 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 EPOPA6NHQ4 379 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 K7ENM7 598 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 GADD45BO75293 160 aaPredicted RBP17.8■□□□□ 0.44
SNRPB-201ENST00000381342 NCKAP1LP55160 1127 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 BTG3Q14201 252 aaPredicted RBP17.8■□□□□ 0.44
SNRPB-201ENST00000381342 PCBP1Q15365 356 aaKnown RBP eCLIP17.8■□□□□ 0.449e-9■■■■□ 24.2
SNRPB-201ENST00000381342 PTPROQ16827 1216 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 FAM187BQ17R55 369 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 SLC24A5Q71RS6 500 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 CDR2LQ86X02 465 aaPredicted RBP17.8■□□□□ 0.44
SNRPB-201ENST00000381342 NPAS4Q8IUM7 802 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 TMEM87AQ8NBN3 555 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 TMEM161BQ8NDZ6 487 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 GDPD5Q8WTR4 605 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 ATXN2LQ8WWM7 1075 aaKnown RBP17.8■□□□□ 0.44
SNRPB-201ENST00000381342 C17orf80Q9BSJ5 609 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 BLZF1Q9H2G9 400 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 CHST12Q9NRB3 414 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 DACT1Q9NYF0 836 aa17.8■□□□□ 0.44
SNRPB-201ENST00000381342 CHD9Q3L8U1 2897 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 AXLP30530 894 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 SMTNP53814 917 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 ASIC1P78348 528 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 AMPD3Q01432 767 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 PRPF4BQ13523 1007 aaKnown RBP17.79■□□□□ 0.44
SNRPB-201ENST00000381342 TMEM132AQ24JP5 1023 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 AAK1Q2M2I8 961 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 EPC2Q52LR7 807 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms