RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 SLC12A2P55011 1212 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 SNX16P57768 344 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 PDIA2Q13087 525 aaKnown RBP12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 GPS1Q13098 491 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 ZBTB17Q13105 803 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 MAPK7Q13164 816 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 DNAJC3Q13217 504 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 ZBED8Q8IZ13 594 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 C4orf33Q8N1A6 199 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 HIC2Q96JB3 615 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 TRIM56Q9BRZ2 755 aaKnown RBP12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 ZNF577Q9BSK1 485 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 EFHD1Q9BUP0 239 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 CALN1Q9BXU9 219 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 UBN1Q9NPG3 1134 aa12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 APOBEC2Q9Y235 224 aaKnown RBP12.24□□□□□ -0.45
THUMPD1-201ENST00000381337 A0A087X0B3 334 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 USP17L15C9J2P7 530 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 USP17L13C9JLJ4 530 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 USP17L11C9JVI0 530 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 USP17L18D6R9N7 530 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 USP17L22D6RA61 530 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 USP17L17D6RBQ6 530 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 USP17L19D6RCP7 530 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 USP17L20D6RJB6 530 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 F8VZ95 297 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 ASAP2O43150 1006 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 TMEM253P0C7T8 217 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 GARSP41250 739 aaKnown RBP12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 USP17L24Q0WX57 530 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 PPP2R5CQ13362 524 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 RPS6KA2Q15349 733 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 EDRF1Q3B7T1 1238 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 TMCO4Q5TGY1 634 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 PPP1R2P3Q6NXS1 205 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 EPS8L3Q8TE67 593 aaKnown RBP12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 CCT6BQ92526 530 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 ANLNQ9NQW6 1124 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 ABCB11O95342 1321 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 CENPPQ6IPU0 288 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 ZNF354CQ86Y25 554 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 RBM41Q96IZ5 413 aaKnown RBP12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 SERPINB12Q96P63 405 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 ANKFY1Q9P2R3 1169 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 TRAF3IP3Q9Y228 551 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 HECW2Q9P2P5 1572 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 LMTK2Q8IWU2 1503 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 CAMSAP1Q5T5Y3 1602 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 FOXP2O15409 715 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 CRCPO75575 148 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 ACADSP16219 412 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 TARSP26639 723 aaKnown RBP12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 ELF3P78545 371 aaPredicted RBP12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 TRAPPC3LQ5T215 181 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 DARS2Q6PI48 645 aaKnown RBP12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 BTNL9Q6UXG8 535 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 XXYLT1Q8NBI6 393 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 SCYL1Q96KG9 808 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 RBM15Q96T37 977 aaKnown RBP eCLIP12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 GDF3Q9NR23 364 aa12.23□□□□□ -0.45
THUMPD1-201ENST00000381337 CLDN3O15551 220 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 LPXNO60711 386 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 CRKLP46109 303 aaKnown RBP12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 DDR1Q08345 913 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 RINT1Q6NUQ1 792 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 ICA1LQ8NDH6 482 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 ZNF711Q9Y462 761 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 SRRM3A6NNA2 597 aaPredicted RBP12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 UBTFL6P0CB48 400 aaPredicted RBP12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 KITP10721 976 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 PIGBQ92521 554 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 CCDC124Q96CT7 223 aaKnown RBP12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 PLA2G12BQ9BX93 195 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 HAO1Q9UJM8 370 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 H0YCG3 227 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 CSF1RP07333 972 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 RARGP13631 454 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 KDSRQ06136 332 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 ART3Q13508 389 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 SH3RF1Q7Z6J0 888 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 ATP11CQ8NB49 1132 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 SH3RF3Q8TEJ3 882 aaPredicted RBP12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 PTPRUQ92729 1446 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 SAT1P21673 171 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 RFX1P22670 979 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 LRRC36Q1X8D7 754 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 SYDE1Q6ZW31 735 aaPredicted RBP12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 KIAA0825Q8IV33 1275 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 CFAP36Q96G28 342 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 CEP95Q96GE4 821 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 RANBP17Q9H2T7 1088 aaKnown RBP12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 SEMA6BQ9H3T3 888 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 DCLRE1BQ9H816 532 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 CYP4F11Q9HBI6 524 aa12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 BSDC1Q9NW68 430 aaPredicted RBP12.22□□□□□ -0.45
THUMPD1-201ENST00000381337 LOC102724428A0A0B4J2F2 783 aa12.21□□□□□ -0.45
THUMPD1-201ENST00000381337 TESPA1A2RU30 521 aaPredicted RBP12.21□□□□□ -0.45
THUMPD1-201ENST00000381337 GOLGA8RI6L899 631 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms