RNA–Protein interactions for RNA: ENST00000380992.5

TSSC4-202, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSSC4, Length 992 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-202ENST00000380992 CATSPER3Q86XQ3 398 aa18.27■□□□□ 0.52
TSSC4-202ENST00000380992 EPHX3Q9H6B9 360 aa18.27■□□□□ 0.52
TSSC4-202ENST00000380992 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
TSSC4-202ENST00000380992 CNTNAP2Q9UHC6 1331 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 SYT1P21579 422 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
TSSC4-202ENST00000380992 RILPL1Q5EBL4 403 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 NOMO2Q5JPE7 1267 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 UBXN11Q5T124 520 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 RBM23Q86U06 439 aaKnown RBP18.26■□□□□ 0.51
TSSC4-202ENST00000380992 SMRP1Q8NCR6 262 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 KHSRPQ92945 711 aaKnown RBP eCLIP18.26■□□□□ 0.51
TSSC4-202ENST00000380992 CCDC51Q96ER9 411 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 NACC1Q96RE7 527 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 POP1Q99575 1024 aaKnown RBP18.26■□□□□ 0.51
TSSC4-202ENST00000380992 TCF25Q9BQ70 676 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 UBN1Q9NPG3 1134 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 KANSL3Q9P2N6 904 aa18.26■□□□□ 0.51
TSSC4-202ENST00000380992 DAXXQ9UER7 740 aaPredicted RBP18.26■□□□□ 0.51
TSSC4-202ENST00000380992 GPR37L1O60883 481 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 ERLIN2O94905 339 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 CSPG5O95196 566 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 NCLP19338 710 aaKnown RBP18.25■□□□□ 0.51
TSSC4-202ENST00000380992 FXR2P51116 673 aaKnown RBP eCLIP18.25■□□□□ 0.51
TSSC4-202ENST00000380992 PDIA5Q14554 519 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 AGMOQ6ZNB7 445 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 MRPL43Q8N983 215 aaKnown RBP18.25■□□□□ 0.51
TSSC4-202ENST00000380992 ERMNQ8TAM6 284 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 PIGOQ8TEQ8 1089 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 LPPQ93052 612 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 NRDE2Q9H7Z3 1164 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 BMP2KQ9NSY1 1161 aaPredicted RBP18.25■□□□□ 0.51
TSSC4-202ENST00000380992 TBC1D13Q9NVG8 400 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 STK39Q9UEW8 545 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 PCDHGC5Q9Y5F6 944 aa18.25■□□□□ 0.51
TSSC4-202ENST00000380992 MEIS3P2A8K0S8 358 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 PER2O15055 1255 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 INPPL1O15357 1258 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 MED24O75448 989 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 GALTP07902 379 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 ALADP13716 330 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 PDCP20941 246 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 GLRA2P23416 452 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 SSTR3P32745 418 aaPredicted RBP18.24■□□□□ 0.51
TSSC4-202ENST00000380992 PBX3P40426 434 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 CAPSQ13938 189 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 BMS1Q14692 1282 aaKnown RBP18.24■□□□□ 0.51
TSSC4-202ENST00000380992 NOTUMQ6P988 496 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 TMC7Q7Z402 723 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 MCPH1Q8NEM0 835 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 CCDC43Q96MW1 224 aaKnown RBP18.24■□□□□ 0.51
TSSC4-202ENST00000380992 ENTPD7Q9NQZ7 604 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 MTMR6Q9Y217 621 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 IRAK3Q9Y616 596 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 STK24Q9Y6E0 443 aa18.24■□□□□ 0.51
TSSC4-202ENST00000380992 A0A087WWV3 80 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 TSPAN1O60635 241 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 SRGAP2BP0DMP2 458 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 ATP2C1P98194 919 aaPredicted RBP18.23■□□□□ 0.51
TSSC4-202ENST00000380992 MBTD1Q05BQ5 628 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 GIT2Q14161 759 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 SMC1AQ14683 1233 aaKnown RBP18.23■□□□□ 0.51
TSSC4-202ENST00000380992 ECM1Q16610 540 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 AMHR2Q16671 573 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 DDX53Q86TM3 631 aaKnown RBP18.23■□□□□ 0.51
TSSC4-202ENST00000380992 IGSF22Q8N9C0 903 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 URGCPQ8TCY9 931 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 ASAP3Q8TDY4 903 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 TMEM169Q96HH4 297 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 IGSF21Q96ID5 467 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 CSRNP2Q9H175 543 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 RSAD1Q9HA92 442 aa18.23■□□□□ 0.51
TSSC4-202ENST00000380992 TDRD15B5MCY1 1934 aaKnown RBP18.22■□□□□ 0.51
TSSC4-202ENST00000380992 VPS37CA5D8V6 355 aaPredicted RBP18.22■□□□□ 0.51
TSSC4-202ENST00000380992 C2orf71A6NGG8 1288 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 HIDE1A8MVS5 230 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 INO80B-WBP1J3KQ70 363 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 LAD1O00515 517 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 ZC3H11AO75152 810 aaKnown RBP eCLIP18.22■□□□□ 0.51
TSSC4-202ENST00000380992 HOXB8P17481 243 aaPredicted RBP18.22■□□□□ 0.51
TSSC4-202ENST00000380992 COL9A1P20849 921 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 PRPHP41219 470 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 RNASELQ05823 741 aaKnown RBP18.22■□□□□ 0.51
TSSC4-202ENST00000380992 RESTQ13127 1097 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 CLUL1Q15846 466 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 PLPP4Q5VZY2 271 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 HAUS3Q68CZ6 603 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 BRAPQ7Z569 592 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 HSCBQ8IWL3 235 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 SMG8Q8ND04 991 aaKnown RBP18.22■□□□□ 0.51
TSSC4-202ENST00000380992 VN1R2Q8NFZ6 395 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 TMEM175Q9BSA9 504 aa18.22■□□□□ 0.51
TSSC4-202ENST00000380992 BARX2Q9UMQ3 279 aaPredicted RBP18.22■□□□□ 0.51
TSSC4-202ENST00000380992 A0A1B0GUA9 196 aa18.21■□□□□ 0.51
TSSC4-202ENST00000380992 NT5C1B-RDH14C9J2C7 533 aa18.21■□□□□ 0.51
TSSC4-202ENST00000380992 ALDH2P05091 517 aa18.21■□□□□ 0.51
TSSC4-202ENST00000380992 ITGA4P13612 1032 aa18.21■□□□□ 0.51
TSSC4-202ENST00000380992 CYP11B2P19099 503 aa18.21■□□□□ 0.51
TSSC4-202ENST00000380992 FAM187BQ17R55 369 aa18.21■□□□□ 0.51
TSSC4-202ENST00000380992 LONRF3Q496Y0 759 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms