RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 C18orf8Q96DM3 657 aa17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 GMLQ99445 158 aa17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 TMEM110-MUSTN1A8MSY1 372 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 CIITAP33076 1130 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 PRELPP51888 382 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 PLTPP55058 493 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 DR1Q01658 176 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 CCDC121Q6ZUS5 278 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 CTNNBL1Q8WYA6 563 aaPredicted RBP17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 LXNQ9BS40 222 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 TLDC2A0PJX2 215 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 PPATQ06203 517 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 LLGL1Q15334 1064 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 CPNE8Q86YQ8 564 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 KRT35Q92764 455 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 PSMD1Q99460 953 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 SLC40A1Q9NP59 571 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 MTMR3Q13615 1198 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 SWT1Q5T5J6 900 aaKnown RBP17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 ZNF746Q6NUN9 644 aaPredicted RBP17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 MIER3Q7Z3K6 550 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 HSD17B14Q9BPX1 270 aa17.57■□□□□ 0.4
NKX3-1-201ENST00000380871 PSMD10O75832 226 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 KRT13P13646 458 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 PSMC2P35998 433 aaKnown RBP17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 PTENP60484 403 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 IRX3P78415 501 aaPredicted RBP17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 CIAPIN1Q6FI81 312 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 FBXO25Q8TCJ0 367 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 SYT11Q9BT88 431 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 MTFR1LQ9H019 292 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 ZDHHC18Q9NUE0 388 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 HAUS2Q9NVX0 235 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 TCEAL9Q9UHQ7 104 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 GOLGA6L7A0A1B0GV03 622 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 ITGB5P18084 799 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 KCNA3P22001 575 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 AGBL2Q5U5Z8 902 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 CCDC114Q96M63 670 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 TEKT3Q9BXF9 490 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 INTS2Q9H0H0 1204 aaKnown RBP17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 PARVGQ9HBI0 331 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 MYOZ2Q9NPC6 264 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 KLC4Q9NSK0 619 aa17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 GREB1LQ9C091 1923 aaPredicted RBP17.56■□□□□ 0.4
NKX3-1-201ENST00000380871 ASNSP08243 561 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 PHLDB3Q6NSJ2 640 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 ZDHHC14Q8IZN3 488 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 RNF25Q96BH1 459 aaPredicted RBP17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 STK33Q9BYT3 514 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 TXLNGYQ9BZA5 131 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 FAM114A2Q9NRY5 505 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 SIPA1L1O43166 1804 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 NCANO14594 1321 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 FOXN3O00409 490 aaPredicted RBP17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 PPFIA2O75334 1257 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 TMEM253P0C7T8 217 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 MMP14P50281 582 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 DLG4P78352 724 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 RANBP17Q9H2T7 1088 aaKnown RBP17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 INTUQ9ULD6 942 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 ATMINO43313 823 aaPredicted RBP17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 RASSF9O75901 435 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 SPP2Q13103 211 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 ANKRD20A8PQ5CZ79 823 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 DUPD1Q68J44 220 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 ZDHHC24Q6UX98 284 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 CPLX4Q7Z7G2 160 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 TATDN2Q93075 761 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 ELMO3Q96BJ8 720 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 TAAR1Q96RJ0 339 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 FIZ1Q96SL8 496 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 SELENOSQ9BQE4 189 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 ERP44Q9BS26 406 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 POLR3CQ9BUI4 534 aaPredicted RBP17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 ACP6Q9NPH0 428 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 OLFML3Q9NRN5 406 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 KCNH7Q9NS40 1196 aa17.55■□□□□ 0.4
NKX3-1-201ENST00000380871 GTPBP10A4D1E9 387 aaKnown RBP17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 LMNB1P20700 586 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 SLCO1A2P46721 670 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 NPEPPSP55786 919 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 IFI35P80217 286 aaPredicted RBP17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 MTMR2Q13614 643 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 C1orf186Q6ZWK4 172 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 JAMLQ86YT9 394 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 EHMT1Q9H9B1 1298 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 DAAM1Q9Y4D1 1078 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 LOC102724159A0A0B4J2E5 919 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 EXOC3O60645 756 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 CTNND1O60716 968 aaKnown RBP17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 HIP1RO75146 1068 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 CYP3A4P08684 503 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 DRD4P21917 467 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 PWP2Q15269 919 aaKnown RBP17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 HS2ST1Q7LGA3 356 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 CACNA2D3Q8IZS8 1091 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 AGPAT3Q9NRZ7 376 aa17.54■□□□□ 0.4
NKX3-1-201ENST00000380871 TCRBV7S2A1N4TA0A589 114 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms