RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 BLMHQ13867 455 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 RINT1Q6NUQ1 792 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 MIGA2Q7L4E1 593 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 NT5DC3Q86UY8 548 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 CPXCR1Q8N123 301 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 LRRC57Q8N9N7 239 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 RUBCNQ92622 972 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 NHSL1Q5SYE7 1610 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 TCRBV7S2A1N4TA0A589 114 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 C5orf60A6NFR6 353 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 SPDYE5A6NIY4 337 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 DR1Q01658 176 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 IFI16Q16666 785 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 ANKRD20A2Q5SQ80 823 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 ANKRD20A1Q5TYW2 823 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 ANKRD20A3Q5VUR7 823 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 HS2ST1Q7LGA3 356 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 AZI2Q9H6S1 392 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 KCNMB3Q9NPA1 279 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 FBXO28Q9NVF7 368 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 RNF14Q9UBS8 474 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 DAAM1Q9Y4D1 1078 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 MYH1P12882 1939 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 MYH4Q9Y623 1939 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 FESP07332 822 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 PDHA1P08559 390 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 SNHG28P0DPA3 235 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 TUBP50607 506 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 CWF19L1Q69YN2 538 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 TRIM74Q86UV6 250 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 TRIM73Q86UV7 250 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 PPM1KQ8N3J5 372 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 ANKRD42Q8N9B4 389 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 SYT2Q8N9I0 419 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 SLC30A5Q8TAD4 765 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 SCFD2Q8WU76 684 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 EDEM3Q9BZQ6 932 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 SEMA4AQ9H3S1 761 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 SIX2Q9NPC8 291 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 ABCF3Q9NUQ8 709 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 TBK1Q9UHD2 729 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 PHLPP1O60346 1717 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 MYH7BA7E2Y1 1941 aa13.41□□□□□ -0.26
PRPF40B-202ENST00000380281 GAS7O60861 476 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 ACSL3O95573 720 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 RPA1P27694 616 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 HSPA9P38646 679 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 SLC29A2Q14542 456 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 TAF11Q15544 211 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 HP1BP3Q5SSJ5 553 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 FAM182AQ5T1J6 154 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 DCAF12L1Q5VU92 463 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 PPP1R18Q6NYC8 613 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 CCDC105Q8IYK2 499 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 MREGQ8N565 214 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 DRAXINQ8NBI3 349 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 ACER1Q8TDN7 264 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 EZH1Q92800 747 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 CHMP6Q96FZ7 201 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 PWWP2AQ96N64 755 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 ELAC2Q9BQ52 826 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 TMX4Q9H1E5 349 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 TYW1Q9NV66 732 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 FRMD4BQ9Y2L6 1034 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 AHCYL1O43865 530 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 FTLP02792 175 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 GHRP10912 638 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 PDCD2Q16342 344 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 ABCB5Q2M3G0 1257 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 CAPN12Q6ZSI9 719 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 SLFN12Q8IYM2 578 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 B4GALNT2Q8NHY0 566 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 DYDC1Q8WWB3 177 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 PBKQ96KB5 322 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 EPAS1Q99814 870 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 LMCD1Q9NZU5 365 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 WRAP73Q9P2S5 460 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 COG5Q9UP83 839 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 PSMC2P35998 433 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 FMO5P49326 533 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 EDRF1Q3B7T1 1238 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 COBLL1Q53SF7 1204 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 MEX3CQ5U5Q3 659 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 FRMD5Q7Z6J6 570 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 ETNPPLQ8TBG4 499 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 SYN2Q92777 582 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 SLC12A4Q9UP95 1085 aa13.4□□□□□ -0.26
PRPF40B-202ENST00000380281 CCDC88AQ3V6T2 1871 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 A0A1W2PRG0 241 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 SRRM3A6NNA2 597 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 H0YGN5 161 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 SPOPO43791 374 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 SOX5P35711 763 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 SPIRE1Q08AE8 756 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms