RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SCFD2Q8WU76 684 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 BBXQ8WY36 941 aaPredicted RBP21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 BICD1Q96G01 975 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 IVNS1ABPQ9Y6Y0 642 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 MACROD2A1Z1Q3 448 aa21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 LRRIQ4A6NIV6 560 aa21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 MAFO75444 373 aaPredicted RBP21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 PTK2Q05397 1052 aa21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 SLC18A3Q16572 532 aa21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 PLPPR4Q7Z2D5 763 aa21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 ABRAQ8N0Z2 381 aa21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 FBXL18Q96ME1 805 aa21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 ADAMTS1Q9UHI8 967 aa21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 DNAJC12Q9UKB3 198 aa21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 DIS3Q9Y2L1 958 aaKnown RBP21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 BZW2Q9Y6E2 419 aaKnown RBP21.59■■□□□ 1.05
PDLIM5-205ENST00000380180 A0A087X0T9 212 aa21.58■■□□□ 1.05
PDLIM5-205ENST00000380180 P4HA2O15460 535 aa21.58■■□□□ 1.05
PDLIM5-205ENST00000380180 N4BP1O75113 896 aaKnown RBP21.58■■□□□ 1.05
PDLIM5-205ENST00000380180 FAM228BP0C875 321 aa21.58■■□□□ 1.05
PDLIM5-205ENST00000380180 MNS1Q8NEH6 495 aa21.58■■□□□ 1.05
PDLIM5-205ENST00000380180 DEPTORQ8TB45 409 aa21.58■■□□□ 1.05
PDLIM5-205ENST00000380180 STK33Q9BYT3 514 aa21.58■■□□□ 1.05
PDLIM5-205ENST00000380180 NMRK2Q9NPI5 230 aa21.58■■□□□ 1.05
PDLIM5-205ENST00000380180 APEX2Q9UBZ4 518 aa21.58■■□□□ 1.05
PDLIM5-205ENST00000380180 PJA2O43164 708 aa21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 GARTP22102 1010 aa21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 PRKCIP41743 596 aa21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 CETN1Q12798 172 aa21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 PHLDB3Q6NSJ2 640 aa21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 TAPT1Q6NXT6 567 aa21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 ZNF571Q7Z3V5 609 aaPredicted RBP21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 ANKRD7Q92527 254 aa21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 KCNN1Q92952 543 aa21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 PARK7Q99497 189 aaKnown RBP21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 USP20Q9Y2K6 914 aa21.58■■□□□ 1.04
PDLIM5-205ENST00000380180 K7ERI5 159 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 TULP1O00294 542 aaPredicted RBP21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 PNMA6AP0CW24 399 aaPredicted RBP21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 STRN3Q13033 797 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 DRP2Q13474 957 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 GPR142Q7Z601 462 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 PARD3BQ8TEW8 1205 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 ATP8B4Q8TF62 1192 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 SECISBP2LQ93073 1101 aaKnown RBP21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 CCDC127Q96BQ5 260 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 MFSD14AQ96MC6 490 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 TMEM117Q9H0C3 514 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 CDC23Q9UJX2 597 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 PPME1Q9Y570 386 aa21.57■■□□□ 1.04
PDLIM5-205ENST00000380180 ZBTB42B2RXF5 422 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 STAT1P42224 750 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 LIG4P49917 911 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 DRAP1Q14919 205 aaPredicted RBP21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 PLCB4Q15147 1175 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 EPC2Q52LR7 807 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 GPD1LQ8N335 351 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 F8VZ95 297 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 LRRN2O75325 713 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 GFPT2O94808 682 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 ITGBL1O95965 494 aaPredicted RBP21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 SCP2P22307 547 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 CAPSQ13938 189 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 ERCC6LQ2NKX8 1250 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 GJC2Q5T442 439 aaPredicted RBP21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 PRPF31Q8WWY3 499 aaKnown RBP21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 POP1Q99575 1024 aaKnown RBP21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 SMARCAD1Q9H4L7 1026 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 VTA1Q9NP79 307 aa21.56■■□□□ 1.04
PDLIM5-205ENST00000380180 ENC1O14682 589 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 PMM2O15305 246 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 FERP16591 822 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 SOX5P35711 763 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 MXI1P50539 228 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 ARHGAP1Q07960 439 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 TUBB2AQ13885 445 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 FAM110CQ1W6H9 321 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 DPP9Q86TI2 863 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 TXLNBQ8N3L3 684 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 TUBB2BQ9BVA1 445 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 GPR88Q9GZN0 384 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 SUGCTQ9HAC7 445 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 LRRIQ3A6PVS8 624 aaPredicted RBP21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 TADA3O75528 432 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 SLC26A2P50443 739 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 HUNKP57058 714 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 AMPD2Q01433 879 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 CYP24A1Q07973 514 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 ELF2Q15723 593 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 MAMDC4Q6UXC1 1216 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 ZNF467Q7Z7K2 595 aaPredicted RBP21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 TMC2Q8TDI7 906 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 FAM213AQ9BRX8 229 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 LUC7LQ9NQ29 371 aaKnown RBP21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 SALL4Q9UJQ4 1053 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 DAAM1Q9Y4D1 1078 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 STYXL1Q9Y6J8 313 aa21.55■■□□□ 1.04
PDLIM5-205ENST00000380180 EVI5O60447 810 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms