RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 EPC2Q52LR7 807 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 INTS8Q75QN2 995 aaKnown RBP13.13□□□□□ -0.31
RFC3-201ENST00000380071 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 CPXCR1Q8N123 301 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 ZNF473Q8WTR7 871 aaKnown RBP13.13□□□□□ -0.31
RFC3-201ENST00000380071 CCT8L2Q96SF2 557 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 PCDHB18PQ96TA0 734 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 PPANQ9NQ55 473 aaKnown RBP13.13□□□□□ -0.31
RFC3-201ENST00000380071 FAM114A2Q9NRY5 505 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 HSPBP1Q9NZL4 362 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 CTTNBP2NLQ9P2B4 639 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 CNOT8Q9UFF9 292 aaKnown RBP13.13□□□□□ -0.31
RFC3-201ENST00000380071 VCAM1P19320 739 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 MRPS9P82933 396 aaKnown RBP13.13□□□□□ -0.31
RFC3-201ENST00000380071 DR1Q01658 176 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 MYBPC2Q14324 1141 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 NLRP14Q86W24 1093 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 CLEC4DQ8WXI8 215 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 ACCSQ96QU6 501 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 GMLQ99445 158 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 TMEM206Q9H813 350 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 NOVA2Q9UNW9 492 aaKnown RBP13.13□□□□□ -0.31
RFC3-201ENST00000380071 DIS3Q9Y2L1 958 aaKnown RBP13.13□□□□□ -0.31
RFC3-201ENST00000380071 ATP8A1Q9Y2Q0 1164 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 SLC16A4O15374 487 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 PLS3P13797 630 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 UGCGQ16739 394 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 TKFCQ3LXA3 575 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 DUPD1Q68J44 220 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 HAUS6Q7Z4H7 955 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 CPNE8Q86YQ8 564 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 ZDHHC14Q8IZN3 488 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 ELMO3Q96BJ8 720 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 FAM107BQ9H098 131 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 TMEM117Q9H0C3 514 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 EFCC1Q9HA90 598 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 AGO4Q9HCK5 861 aaKnown RBP13.12□□□□□ -0.31
RFC3-201ENST00000380071 HOMER2Q9NSB8 354 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 RPTORQ8N122 1335 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 E7EVH7 732 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
RFC3-201ENST00000380071 CPP00450 1065 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 ICAM1P05362 532 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 CHRNB2P17787 502 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 QARSP47897 775 aaKnown RBP13.12□□□□□ -0.31
RFC3-201ENST00000380071 PEX3P56589 373 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 MTMR3Q13615 1198 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 ODF2Q5BJF6 829 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 RUFY4Q6ZNE9 571 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 RHOT2Q8IXI1 618 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 XXYLT1Q8NBI6 393 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 SUPT20HQ8NEM7 779 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 MYCBPAPQ8TBZ2 947 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 NEK9Q8TD19 979 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 C18orf8Q96DM3 657 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 ERP44Q9BS26 406 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 SLC12A6Q9UHW9 1150 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 SNX24Q9Y343 169 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 DAAM1Q9Y4D1 1078 aa13.12□□□□□ -0.31
RFC3-201ENST00000380071 BACH1O14867 736 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 ADRB2P07550 413 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 RFX1P22670 979 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 YWHABP31946 246 aaKnown RBP13.11□□□□□ -0.31
RFC3-201ENST00000380071 GPC5P78333 572 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 CETN1Q12798 172 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 MESDQ14696 234 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 B4GALNT4Q76KP1 1039 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 NOP9Q86U38 636 aaKnown RBP13.11□□□□□ -0.31
RFC3-201ENST00000380071 SLC47A2Q86VL8 602 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 FMNL3Q8IVF7 1028 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 OGFOD1Q8N543 542 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 SEMA4DQ92854 862 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 BTBD6Q96KE9 485 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 FMO2Q99518 471 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 POP1Q99575 1024 aaKnown RBP13.11□□□□□ -0.31
RFC3-201ENST00000380071 ZNF341Q9BYN7 854 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 TXLNGYQ9BZA5 131 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 DEFB129Q9H1M3 183 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 ZDHHC18Q9NUE0 388 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 DBR1Q9UK59 544 aaKnown RBP13.11□□□□□ -0.31
RFC3-201ENST00000380071 ANKRD63C9JTQ0 380 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 CYP26A1O43174 497 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 ATP9AO75110 1047 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 ERLIN2O94905 339 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 MAPTP10636 758 aaKnown RBP13.11□□□□□ -0.31
RFC3-201ENST00000380071 ALAS1P13196 640 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 COMTP21964 271 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 PLTPP55058 493 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 GTF2BQ00403 316 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 MAP2K1Q02750 393 aaPredicted RBP13.11□□□□□ -0.31
RFC3-201ENST00000380071 JAMLQ86YT9 394 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 CBWD2Q8IUF1 395 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 KAT2BQ92831 832 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 KREMEN1Q96MU8 473 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 TAAR1Q96RJ0 339 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 RAB17Q9H0T7 212 aa13.11□□□□□ -0.31
RFC3-201ENST00000380071 RAVER2Q9HCJ3 691 aaKnown RBP13.11□□□□□ -0.31
RFC3-201ENST00000380071 ZNF277Q9NRM2 450 aaPredicted RBP13.11□□□□□ -0.31
RFC3-201ENST00000380071 UBIAD1Q9Y5Z9 338 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms