RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 HOXA7P31268 230 aaPredicted RBP12.21□□□□□ -0.46
SMAD9-202ENST00000379826 ELF1P32519 619 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 NT5C1BQ96P26 610 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 INTUQ9ULD6 942 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 FAM187AA6NFU0 413 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 CLDN3O15551 220 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 FECHP22830 423 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 FLT3P36888 993 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 DPP9Q86TI2 863 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 VPS52Q8N1B4 723 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 CCDC89Q8N998 374 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 ACTRT1Q8TDG2 376 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 KAT2BQ92831 832 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 C4AP0C0L4 1744 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 C4BP0C0L5 1744 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 CCT8L1PA6NM43 557 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 GOLGA8SH3BPF8 625 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 GOLGA8MH3BSY2 632 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 SGK1O00141 431 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 NKRFO15226 690 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 PIK3CAP42336 1068 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 ITIH3Q06033 890 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 SAAL1Q96ER3 474 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 PITPNM3Q9BZ71 974 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 EXOC1LA0A1B0GW35 172 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 ZBTB24O43167 697 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 HUNKP57058 714 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 BYSLQ13895 437 aaKnown RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 DHX34Q14147 1143 aaKnown RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 LRRC55Q6ZSA7 311 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 CSRNP1Q96S65 589 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 ERP44Q9BS26 406 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 RTFDC1Q9BY42 306 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 STK33Q9BYT3 514 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 CNOT8Q9UFF9 292 aaKnown RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 PPP1R9AQ9ULJ8 1098 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 KCPQ6ZWJ8 1503 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 SLC16A3O15427 465 aaKnown RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 BRAFP15056 766 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 ATP2A2P16615 1042 aaKnown RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 STAT2P52630 851 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 STRN3Q13033 797 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 ZNF662Q6ZS27 426 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 KLHL11Q9NVR0 708 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 NOP53Q9NZM5 478 aaKnown RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 APEX2Q9UBZ4 518 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 AKAP3O75969 853 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 GH2P01242 217 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 PRELPP51888 382 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 PEX3P56589 373 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 EDRF1Q3B7T1 1238 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 SUGP1Q8IWZ8 645 aaKnown RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 PALM2Q8IXS6 379 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 DCAF4Q8WV16 495 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 CCDC17Q96LX7 622 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 MTMR9Q96QG7 549 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 MAK16Q9BXY0 300 aaKnown RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 FGFR1OP2Q9NVK5 253 aa12.2□□□□□ -0.46
SMAD9-202ENST00000379826 TTC7AQ9ULT0 858 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-202ENST00000379826 SCN11AQ9UI33 1791 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 RASSF10A6NK89 507 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 RASA4BC9J798 803 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 SLC16A4O15374 487 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 RASA4O43374 803 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 VAMP7P51809 220 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 CASP5P51878 434 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 DMP1Q13316 513 aaPredicted RBP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 GIT2Q14161 759 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 ELMO3Q96BJ8 720 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 PURBQ96QR8 312 aaKnown RBP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 NOD2Q9HC29 1040 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 SAYSD1Q9NPB0 183 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 F8VZ95 297 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 OPLAHO14841 1288 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 SHOX2O60902 331 aaPredicted RBP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 HSPA6P17066 643 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 ADRA2BP18089 450 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 COMTP21964 271 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 TMEM119Q4V9L6 283 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 BARGINQ6ZT62 677 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 EPM2AIP1Q7L775 607 aaPredicted RBP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 TRIM59Q8IWR1 403 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 PPFIBP2Q8ND30 876 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 ZNF277Q9NRM2 450 aaPredicted RBP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 PCDHB4Q9Y5E5 795 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 SHBGP04278 402 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 TNFRSF8P28908 595 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 QPCTQ16769 361 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 CCDC62Q6P9F0 684 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 TRPM8Q7Z2W7 1104 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 ANKFY1Q9P2R3 1169 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 CCPG1Q9ULG6 757 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 MYH15Q9Y2K3 1946 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 MIF4GDA9UHW6 222 aaKnown RBP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 PDHA1P08559 390 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 SARNPP82979 210 aaKnown RBP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 PPP1R21Q6ZMI0 780 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 TMC3Q7Z5M5 1100 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms