RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 GH1P01241 217 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 TRMT10CQ7L0Y3 403 aaKnown RBP11.68□□□□□ -0.54
USP6NL-202ENST00000379237 SCFD2Q8WU76 684 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 LARP4BQ92615 738 aaKnown RBP11.68□□□□□ -0.54
USP6NL-202ENST00000379237 FAM89AQ96GI7 184 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 ZNF496Q96IT1 587 aaPredicted RBP11.68□□□□□ -0.54
USP6NL-202ENST00000379237 SERPINB12Q96P63 405 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 ASB3Q9Y575 518 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 ABCC6O95255 1503 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 EFCAB6Q5THR3 1501 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 RARGP13631 454 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 B3GNT6Q6ZMB0 384 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 ATP11CQ8NB49 1132 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 NAT14Q8WUY8 206 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 PHF20Q9BVI0 1012 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.68□□□□□ -0.541e-6■■■■■ 54.3
USP6NL-202ENST00000379237 WDR37Q9Y2I8 494 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 SYNGAP1Q96PV0 1343 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 H7C1W4 665 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 ADAMTS2O95450 1211 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 NUDT17P0C025 328 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 ACTN1P12814 892 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 HSPA1LP34931 641 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 DMPKQ09013 629 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 TBL3Q12788 808 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 RBM26Q5T8P6 1007 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 TEKT1Q969V4 418 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 MAML3Q96JK9 1138 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 METTL14Q9HCE5 456 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 SPATA7Q9P0W8 599 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 HEY2Q9UBP5 337 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 ZNF212Q9UDV6 495 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 PRR36Q9H6K5 1346 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 PALM3A6NDB9 673 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 NR2F2P24468 414 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 CACNB1Q02641 598 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 NONOQ15233 471 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 TXNRD1Q16881 649 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 TBC1D16Q8TBP0 767 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 CDC42EP4Q9H3Q1 356 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 C6orf50Q9HD87 102 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 LNPEPQ9UIQ6 1025 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 CNOT7Q9UIV1 285 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 OVOS2A0A0J9YW53 1432 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 OVOS2Q6IE36 1432 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 ANKARQ7Z5J8 1434 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 TTLL1O95922 423 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 C16orf72Q14CZ0 275 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 FAM47AQ5JRC9 791 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 SLC25A41Q8N5S1 370 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 STRBPQ96SI9 672 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 TRABDQ9H4I3 376 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 DIS3Q9Y2L1 958 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 TMA7Q9Y2S6 64 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 FOXO6A8MYZ6 492 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 PLS3P13797 630 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 LMNB1P20700 586 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 RFX5P48382 616 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 AP1B1Q10567 949 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 CETN1Q12798 172 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 PSMD6Q15008 389 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 CYTH1Q15438 398 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 PATL1Q86TB9 770 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 BTBD10Q9BSF8 475 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 MKNK1Q9BUB5 465 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 TTYH3Q9C0H2 523 aa11.67□□□□□ -0.54
USP6NL-202ENST00000379237 UTP6Q9NYH9 597 aaKnown RBP11.67□□□□□ -0.54
USP6NL-202ENST00000379237 CEMIPQ8WUJ3 1361 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 MAGEB6P1A0A0J9YX57 407 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 YY1P25490 414 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 CDK7P50613 346 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 PHEXP78562 749 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 KCNH2Q12809 1159 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 C1orf228Q6PIY5 440 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 ANO5Q75V66 913 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 SLCO1B3Q9NPD5 702 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 PIH1D3Q9NQM4 214 aaKnown RBP11.66□□□□□ -0.54
USP6NL-202ENST00000379237 TBC1D23Q9NUY8 699 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 ANKFY1Q9P2R3 1169 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.66□□□□□ -0.54
USP6NL-202ENST00000379237 P4HA2O15460 535 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 EXOC3O60645 756 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 PHF2O75151 1096 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 CREB1P16220 341 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 EIF4BP23588 611 aaKnown RBP11.66□□□□□ -0.54
USP6NL-202ENST00000379237 GALCP54803 685 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 MIIPQ5JXC2 388 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 ATG9AQ7Z3C6 839 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 GLYCTKQ8IVS8 523 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 TUBGCP5Q96RT8 1024 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 LZTS2Q9BRK4 669 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 NAGPAQ9UK23 515 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 ZNF148Q9UQR1 794 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.66□□□□□ -0.54
USP6NL-202ENST00000379237 RPL13P26373 211 aaKnown RBP11.66□□□□□ -0.54
USP6NL-202ENST00000379237 MCAMP43121 646 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms