RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 AGPAT5Q9NUQ2 364 aa19.93■□□□□ 0.78
PDLIM4-202ENST00000379018 COL4A3BPQ9Y5P4 624 aa19.93■□□□□ 0.78
PDLIM4-202ENST00000379018 ID4P47928 161 aa19.92■□□□□ 0.78
PDLIM4-202ENST00000379018 NPEPPSP55786 919 aa19.92■□□□□ 0.78
PDLIM4-202ENST00000379018 NTRK3Q16288 839 aa19.92■□□□□ 0.78
PDLIM4-202ENST00000379018 Q4G0T1 1027 aa19.92■□□□□ 0.78
PDLIM4-202ENST00000379018 ANO5Q75V66 913 aa19.92■□□□□ 0.78
PDLIM4-202ENST00000379018 TMEM143Q96AN5 459 aa19.92■□□□□ 0.78
PDLIM4-202ENST00000379018 RTP3Q9BQQ7 232 aa19.92■□□□□ 0.78
PDLIM4-202ENST00000379018 SLKQ9H2G2 1235 aaPredicted RBP19.92■□□□□ 0.78
PDLIM4-202ENST00000379018 CA14Q9ULX7 337 aa19.92■□□□□ 0.78
PDLIM4-202ENST00000379018 NID2Q14112 1375 aa19.92■□□□□ 0.78
PDLIM4-202ENST00000379018 DMDP11532 3685 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 NRP1O14786 923 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 N4BP1O75113 896 aaKnown RBP19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 ZNF623O75123 536 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 ALDH2P05091 517 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 SPATA31D3P0C874 917 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 OR1G1P47890 313 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 PSMC5P62195 406 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 SPATA31D4Q6ZUB0 917 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 ST13P5Q8NFI4 369 aaPredicted RBP19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 RIN2Q8WYP3 895 aaPredicted RBP19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 MINDY3Q9H8M7 445 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 IFT122Q9HBG6 1241 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 SNX14Q9Y5W7 946 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 GVINP1Q7Z2Y8 2422 aa19.91■□□□□ 0.78
PDLIM4-202ENST00000379018 CCDC195A0A1B0GUA6 201 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 INPPL1O15357 1258 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 RFPL2O75678 378 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 IFNAR1P17181 557 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 SPECC1Q5M775 1068 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 TAS1R1Q7RTX1 841 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 GLYCTKQ8IVS8 523 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 ZNF579Q8NAF0 562 aaKnown RBP19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 SLC7A3Q8WY07 619 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 CEP170P1Q96L14 293 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 JPH2Q9BR39 696 aaPredicted RBP19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 TMEM175Q9BSA9 504 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 APOL6Q9BWW8 343 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 DDX25Q9UHL0 483 aaKnown RBP19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 PCDHA4Q9UN74 947 aa19.9■□□□□ 0.78
PDLIM4-202ENST00000379018 EML1O00423 815 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 TEX28O15482 410 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 CLUHO75153 1309 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 GLUD1P00367 558 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 SOD2P04179 222 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 ADH1AP07327 375 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 RPS6KB1P23443 525 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 SSRP1Q08945 709 aaKnown RBP19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 INF2Q27J81 1249 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 C15orf39Q6ZRI6 1047 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 TRIM22Q8IYM9 498 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 ETNPPLQ8TBG4 499 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 PRPF31Q8WWY3 499 aaKnown RBP19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 SMG7Q92540 1137 aaKnown RBP19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 HERC2P3Q9BVR0 1158 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 C22orf23Q9BZE7 217 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 SH3GLB2Q9NR46 395 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 MARCH5Q9NX47 278 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 IGSF9Q9P2J2 1179 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 KANSL3Q9P2N6 904 aa19.89■□□□□ 0.77
PDLIM4-202ENST00000379018 CNTNAP2Q9UHC6 1331 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 F8W810 466 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 SLC37A4O43826 429 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 LILRB3O75022 631 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 ITGA4P13612 1032 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 PDIA3P30101 505 aaKnown RBP19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 GLUD2P49448 558 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 UBXN11Q5T124 520 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 B3GNT9Q6UX72 402 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 GET4Q7L5D6 327 aaPredicted RBP19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 BLIDQ8IZY5 108 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 PSPC1Q8WXF1 523 aaKnown RBP19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 STAMQ92783 540 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 B3GALT6Q96L58 329 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 RPS6KC1Q96S38 1066 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 MYADMQ96S97 322 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 HINFPQ9BQA5 517 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 TBC1D17Q9HA65 648 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 PIDD1Q9HB75 910 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 STK39Q9UEW8 545 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 R4GN57 208 aa19.88■□□□□ 0.77
PDLIM4-202ENST00000379018 EP300Q09472 2414 aaPredicted RBP19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 KRBA1A5PL33 1030 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 ERLIN2O94905 339 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 MLH1P40692 756 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 QARSP47897 775 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 LAMTOR4Q0VGL1 99 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 NONOQ15233 471 aaKnown RBP eCLIP19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 ELMSAN1Q6PJG2 1045 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 SRGAP1Q7Z6B7 1085 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 MRPL10Q7Z7H8 261 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 PALB2Q86YC2 1186 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 RNF149Q8NC42 400 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 CPB2Q96IY4 423 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 AIFM3Q96NN9 605 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 GAD1Q99259 594 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 LARP6Q9BRS8 491 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 EIF2AQ9BY44 585 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms