RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 RIC8AQ9NPQ8 531 aa7.23□□□□□ -1.25
CDKAL1-202ENST00000378610 KMT5AQ9NQR1 393 aa7.23□□□□□ -1.25
CDKAL1-202ENST00000378610 BAIAP2L1Q9UHR4 511 aa7.23□□□□□ -1.25
CDKAL1-202ENST00000378610 PCDHGA4Q9Y5G9 962 aa7.23□□□□□ -1.25
CDKAL1-202ENST00000378610 TOGARAM1Q9Y4F4 1720 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 GOLGA8AA7E2F4 631 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 O00370 1275 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 GPAA1O43292 621 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 PENKP01210 267 aaPredicted RBP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 ATP2A2P16615 1042 aaKnown RBP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 ATP6V1C1P21283 382 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 ADD2P35612 726 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 SOX5P35711 763 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 CTCFP49711 727 aaPredicted RBP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 GNAQP50148 359 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 RENBPP51606 427 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 RBM5P52756 815 aaKnown RBP eCLIP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 KCNJ2P63252 427 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 ITKQ08881 620 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 MAP3K12Q12852 859 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 LAMB3Q13751 1172 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 NAB2Q15742 525 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 RRP12Q5JTH9 1297 aaKnown RBP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 ZNF354CQ86Y25 554 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 FAM81AQ8TBF8 368 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 TBC1D16Q8TBP0 767 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 DTNBP1Q96EV8 351 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 RBM41Q96IZ5 413 aaKnown RBP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 RNF26Q9BY78 433 aaPredicted RBP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 NENFQ9UMX5 172 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 PHF24Q9UPV7 400 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 TRIM75PA6NK02 468 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 NCK2O43639 380 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 FLOT1O75955 427 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 TIE1P35590 1138 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 TUBP50607 506 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 BCAMP50895 628 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 MRPS25P82663 173 aaKnown RBP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 ADAM9Q13443 819 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 PPP2R5BQ15173 497 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 PARP6Q2NL67 630 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 CCDC57Q2TAC2 916 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 GBP7Q8N8V2 638 aaPredicted RBP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 KCNH5Q8NCM2 988 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 TUBGCP2Q9BSJ2 902 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 SLC26A6Q9BXS9 759 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 OSBPL1AQ9BXW6 950 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 KRT23Q9C075 422 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 RAB17Q9H0T7 212 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 CHCHD3Q9NX63 227 aaKnown RBP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 KCNJ14Q9UNX9 436 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 GDAQ9Y2T3 454 aa7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 COL1A1P02452 1464 aaPredicted RBP7.22□□□□□ -1.25
CDKAL1-202ENST00000378610 TRIM49BA6NDI0 452 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 M0R2N6 131 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 EYA2O00167 538 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 SNX3O60493 162 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 MTA2O94776 668 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 KRT16P08779 473 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 GNAT1P11488 350 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 PEX19P40855 299 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 PERM1Q5SV97 790 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 ARL6IP4Q66PJ3 421 aaKnown RBP7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 ARHGAP22Q7Z5H3 698 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 TRIM74Q86UV6 250 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 TRIM73Q86UV7 250 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 RASSF3Q86WH2 238 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 ZNF454Q8N9F8 522 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 ANKLE1Q8NAG6 615 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 ATP8B4Q8TF62 1192 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 PGBD4Q96DM1 585 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 TRIM56Q9BRZ2 755 aaKnown RBP7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 IRAK4Q9NWZ3 460 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 LRFN2Q9ULH4 789 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 TTC7AQ9ULT0 858 aaPredicted RBP7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 PPT2Q9UMR5 302 aa7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 RPL26L1Q9UNX3 145 aaKnown RBP7.21□□□□□ -1.25
CDKAL1-202ENST00000378610 GOLGA6L10A6NI86 522 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 COBLO75128 1261 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 CXCR5P32302 372 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 FLT3P36888 993 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 DGKGP49619 791 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 TIMM10P62072 90 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 ACVR2BQ13705 512 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 UBE3CQ15386 1083 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 SPA17Q15506 151 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 ESCO1Q5FWF5 840 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 SPDYAQ5MJ70 313 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 FOXB2Q5VYV0 432 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 CNBD1Q8NA66 436 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 EPS8L3Q8TE67 593 aaKnown RBP7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 SNRNP27Q8WVK2 155 aaKnown RBP7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 UTP4Q969X6 686 aaKnown RBP7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 CCDC42Q96M95 316 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 NOX5Q96PH1 765 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 PLEKHG4BQ96PX9 1271 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 TSC22D3Q99576 134 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 MYD88Q99836 296 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms