RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 FBXO41Q8TF61 875 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 FAF2Q96CS3 445 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 PPP1R16BQ96T49 567 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 ACAD9Q9H845 621 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 JMJD4Q9H9V9 463 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 APEX2Q9UBZ4 518 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 RTN2O75298 545 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 DCTN3O75935 186 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 BRAFP15056 766 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 RPA1P27694 616 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 FMO5P49326 533 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 KPNA2P52292 529 aaKnown RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 REXO1L1PQ8IX06 675 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 CFAP36Q96G28 342 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 POLR3FQ9H1D9 316 aaPredicted RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 AGO2Q9UKV8 859 aaKnown RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 PNMA3Q9UL41 463 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 KIF3CO14782 793 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 NAB2Q15742 525 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 TOPORSQ9NS56 1045 aaPredicted RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 RBAKQ9NYW8 714 aaPredicted RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 DIP2BQ9P265 1576 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 KRT38O76015 456 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 SEPT6Q14141 434 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 VPS72Q15906 364 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 HDAC11Q96DB2 347 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 TRIM55Q9BYV6 548 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 ATF5Q9Y2D1 282 aaPredicted RBP12.04□□□□□ -0.48
RPGR-203ENST00000378505 FGFR2P21802 821 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 NBPF9Q3BBW0 867 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 Q3C1V9 767 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 ZNF449Q6P9G9 518 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 MMS22LQ6ZRQ5 1243 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 EPM2AIP1Q7L775 607 aaPredicted RBP12.04□□□□□ -0.48
RPGR-203ENST00000378505 NLRP14Q86W24 1093 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 MRPL4Q9BYD3 311 aaKnown RBP12.04□□□□□ -0.48
RPGR-203ENST00000378505 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 FAM49AQ9H0Q0 323 aaPredicted RBP12.04□□□□□ -0.48
RPGR-203ENST00000378505 PRR12Q9ULL5 1215 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 TTC7AQ9ULT0 858 aaPredicted RBP12.04□□□□□ -0.48
RPGR-203ENST00000378505 CNTNAP4Q9C0A0 1308 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 KIAA0391O15091 583 aaKnown RBP12.04□□□□□ -0.48
RPGR-203ENST00000378505 YWHABP31946 246 aaKnown RBP12.04□□□□□ -0.48
RPGR-203ENST00000378505 TOB1P50616 345 aaPredicted RBP12.04□□□□□ -0.48
RPGR-203ENST00000378505 GPC3P51654 580 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 AP3M2P53677 418 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 RBBP5Q15291 538 aaKnown RBP12.04□□□□□ -0.48
RPGR-203ENST00000378505 MUM1L1Q5H9M0 696 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 FAM47EQ6ZV65 393 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 MKNK1Q9BUB5 465 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 PLAGL2Q9UPG8 496 aa12.04□□□□□ -0.48
RPGR-203ENST00000378505 GOLGA8CPA6NN73 597 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 UBE2Q2LH0YL09 131 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 COPEO14579 308 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 CYP26A1O43174 497 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 ZSCAN20P17040 1043 aaPredicted RBP12.03□□□□□ -0.48
RPGR-203ENST00000378505 NTRK3Q16288 839 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 KLHL38Q2WGJ6 581 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 ARL13BQ3SXY8 428 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 RASIP1Q5U651 963 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 UVRAGQ9P2Y5 699 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 SLC12A6Q9UHW9 1150 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 MAP2P11137 1827 aaKnown RBP12.03□□□□□ -0.48
RPGR-203ENST00000378505 SCP2P22307 547 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 PSMC1P62191 440 aaKnown RBP12.03□□□□□ -0.48
RPGR-203ENST00000378505 KIF22Q14807 665 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 DUOXA2Q1HG44 320 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 BEND6Q5SZJ8 279 aaPredicted RBP12.03□□□□□ -0.48
RPGR-203ENST00000378505 ABI1Q8IZP0 508 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 TTC39CQ8N584 583 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.03□□□□□ -0.48
RPGR-203ENST00000378505 PPP1R37O75864 691 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 DGAT1O75907 488 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 ATP5HO75947 161 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 SLC9A1P19634 815 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 STX1BP61266 288 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 THOC5Q13769 683 aaKnown RBP12.03□□□□□ -0.48
RPGR-203ENST00000378505 NOA1Q8NC60 698 aaKnown RBP12.03□□□□□ -0.48
RPGR-203ENST00000378505 DEPDC1BQ8WUY9 529 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 LPAR1Q92633 364 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 SYN2Q92777 582 aaPredicted RBP12.03□□□□□ -0.48
RPGR-203ENST00000378505 SLC10A4Q96EP9 437 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 CHMP6Q96FZ7 201 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 SNF8Q96H20 258 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 MS4A14Q96JA4 679 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 CYP26B1Q9NR63 512 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 HSPBP1Q9NZL4 362 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 FHOD1Q9Y613 1164 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 CHUKO15111 745 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 BYSLQ13895 437 aaKnown RBP12.03□□□□□ -0.48
RPGR-203ENST00000378505 SEC23AQ15436 765 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 KIAA1755Q5JYT7 1200 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 RAB44Q7Z6P3 723 aaPredicted RBP12.03□□□□□ -0.48
RPGR-203ENST00000378505 MCUQ8NE86 351 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 TTC17Q96AE7 1141 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 SLC9A2Q9UBY0 812 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 MAD2L2Q9UI95 211 aa12.03□□□□□ -0.48
RPGR-203ENST00000378505 KRT14P02533 472 aa12.02□□□□□ -0.48
RPGR-203ENST00000378505 SDC4P31431 198 aa12.02□□□□□ -0.48
RPGR-203ENST00000378505 SLC1A1P43005 524 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms