RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TPD52P55327 224 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 OCA2Q04671 838 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 CETN1Q12798 172 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 NR1I3Q14994 352 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 CLEC4GQ6UXB4 293 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 GSDMAQ96QA5 445 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 PLIN2Q99541 437 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 FOXP1Q9H334 677 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 NHEJ1Q9H9Q4 299 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 TRNAU1APQ9NX07 287 aaKnown RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 GIN1Q9NXP7 522 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 DLC1Q96QB1 1528 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 AFF2P51816 1311 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 ADGRB2O60241 1585 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 ENO2P09104 434 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 C21orf59P57076 290 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 ADRM1Q16186 407 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 LRRC36Q1X8D7 754 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 KRT80Q6KB66 452 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 TRIM63Q969Q1 353 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 DNAJC1Q96KC8 554 aaKnown RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 MLXIPLQ9NP71 852 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 LNPEPQ9UIQ6 1025 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 SLC12A4Q9UP95 1085 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 COQ6Q9Y2Z9 468 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 ZC3H13Q5T200 1668 aaKnown RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 ADGRL3Q9HAR2 1447 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 RTP1P59025 263 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 SPIDRQ14159 915 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 CNNM4Q6P4Q7 775 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 RFX8Q6ZV50 586 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 GALNT6Q8NCL4 622 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 GABPB2Q8TAK5 448 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 IL25Q9H293 177 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 THAP9Q9H5L6 903 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 SEMA3EO15041 775 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 GNA14O95837 355 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 IL4RP24394 825 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 PGM1P36871 562 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 FXR1P51114 621 aaKnown RBP eCLIP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 BNIP1Q12981 228 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 PDAP1Q13442 181 aaKnown RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 ARHGEF6Q15052 776 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 HAUS3Q68CZ6 603 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 DNAJC10Q8IXB1 793 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 IQCKQ8N0W5 287 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 CRACR2BQ8N4Y2 399 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 ZBTB38Q8NAP3 1195 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 C12orf4Q9NQ89 552 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 ZNF212Q9UDV6 495 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 TBKBP1A7MCY6 615 aa12.52□□□□□ -0.4
NPHP4-202ENST00000378161 PRDM1O75626 825 aa12.52□□□□□ -0.4
NPHP4-202ENST00000378161 MORC3Q14149 939 aa12.52□□□□□ -0.4
NPHP4-202ENST00000378161 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.4
NPHP4-202ENST00000378161 SV2BQ7L1I2 683 aa12.52□□□□□ -0.4
NPHP4-202ENST00000378161 ANKRD35Q8N283 1001 aa12.52□□□□□ -0.4
NPHP4-202ENST00000378161 U2AF1L4Q8WU68 220 aaKnown RBP12.52□□□□□ -0.4
NPHP4-202ENST00000378161 CENPTQ96BT3 561 aa12.52□□□□□ -0.4
NPHP4-202ENST00000378161 STMN3Q9NZ72 180 aa12.52□□□□□ -0.4
NPHP4-202ENST00000378161 CFAP69A5D8W1 941 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 C5orf60A6NFR6 353 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 UBAP1LF5GYI3 381 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 RPL5P46777 297 aaKnown RBP12.52□□□□□ -0.41
NPHP4-202ENST00000378161 EPHA10Q5JZY3 1008 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 STXBP4Q6ZWJ1 553 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 AS3MTQ9HBK9 375 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 H7C1D1 291 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 OXSR1O95747 527 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-202ENST00000378161 ADORA1P30542 326 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 TCF7P36402 384 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-202ENST00000378161 PLTPP55058 493 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 THOC5Q13769 683 aaKnown RBP12.52□□□□□ -0.41
NPHP4-202ENST00000378161 CLPPQ16740 277 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-202ENST00000378161 TAS2R42Q7RTR8 314 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 CCDC84Q86UT8 332 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-202ENST00000378161 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
NPHP4-202ENST00000378161 RETREG1Q9H6L5 497 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 DNAJC17Q9NVM6 304 aaKnown RBP12.52□□□□□ -0.41
NPHP4-202ENST00000378161 TRIM33Q9UPN9 1127 aa12.52□□□□□ -0.41
NPHP4-202ENST00000378161 USP32Q8NFA0 1604 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 GAS8O95995 478 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 KRT6AP02538 564 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 KRT6BP04259 564 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 TPBGLP0DKB5 382 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 KRT3P12035 628 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 IST1P53990 364 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 GEMIN4P57678 1058 aaKnown RBP12.51□□□□□ -0.41
NPHP4-202ENST00000378161 TRPC3Q13507 836 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 PRKG1Q13976 671 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 ZFRQ96KR1 1074 aaKnown RBP12.51□□□□□ -0.41
NPHP4-202ENST00000378161 CHP1Q99653 195 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 MRPL1Q9BYD6 325 aaKnown RBP12.51□□□□□ -0.41
NPHP4-202ENST00000378161 USP40Q9NVE5 1235 aa12.51□□□□□ -0.41
NPHP4-202ENST00000378161 RRN3Q9NYV6 651 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms