RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 HAUS8Q9BT25 410 aa16.06■□□□□ 0.16
NPHP4-201ENST00000378156 JPH1Q9HDC5 661 aaPredicted RBP16.06■□□□□ 0.16
NPHP4-201ENST00000378156 ACTN1P12814 892 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 BASP1P80723 227 aaKnown RBP16.05■□□□□ 0.16
NPHP4-201ENST00000378156 SATB1Q01826 763 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 E2F5Q15329 346 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 RPS6KA2Q15349 733 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 TRIM42Q8IWZ5 723 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 MAD2L2Q9UI95 211 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 SART1O43290 800 aaKnown RBP16.05■□□□□ 0.16
NPHP4-201ENST00000378156 SLC12A6Q9UHW9 1150 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 NMT1P30419 496 aaKnown RBP16.05■□□□□ 0.16
NPHP4-201ENST00000378156 EIF3BP55884 814 aaKnown RBP16.05■□□□□ 0.16
NPHP4-201ENST00000378156 ARHGEF18Q6ZSZ5 1173 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 IL17RAQ96F46 866 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 TXLNGQ9NUQ3 528 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 PFDN6O15212 129 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 SAT1P21673 171 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 GUCY2CP25092 1073 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 ICE2Q659A1 982 aa16.05■□□□□ 0.16
NPHP4-201ENST00000378156 TWF2Q6IBS0 349 aaKnown RBP16.05■□□□□ 0.16
NPHP4-201ENST00000378156 GOLGA8QA0A0J9YX86 632 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 GOLGA8OA6NCC3 632 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 ASB14A6NK59 587 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 GOLGA8NF8WBI6 632 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 ZRANB2O95218 330 aaKnown RBP eCLIP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 DPEP1P16444 411 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 YWHABP31946 246 aaKnown RBP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 ARPP19P56211 112 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 ANGEL2Q5VTE6 544 aaKnown RBP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 CYFIP1Q7L576 1253 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 MRPL4Q9BYD3 311 aaKnown RBP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 ZNF18P17022 549 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 CYP2C19P33261 490 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 GARSP41250 739 aaKnown RBP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 PKN1Q16512 942 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 FRMD5Q7Z6J6 570 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 ZNF668Q96K58 619 aaPredicted RBP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.04■□□□□ 0.162e-7■■■■□ 21.2
NPHP4-201ENST00000378156 ELP3Q9H9T3 547 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 MYCP01106 439 aaPredicted RBP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 PSMA2P25787 234 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 STAT5BP51692 787 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 TMED2Q15363 201 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 EARS2Q5JPH6 523 aaKnown RBP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 TMEM39BQ9GZU3 492 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 INTS2Q9H0H0 1204 aaKnown RBP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 SLC18A3Q16572 532 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 DNAAF3Q8N9W5 541 aa16.04■□□□□ 0.16
NPHP4-201ENST00000378156 FAM217BQ9NTX9 383 aaPredicted RBP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 NOC2LQ9Y3T9 749 aaKnown RBP16.04■□□□□ 0.16
NPHP4-201ENST00000378156 RIMS1Q86UR5 1692 aaKnown RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 NR3C2P08235 984 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 SERPINB6P35237 376 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 GPC3P51654 580 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 KCNV1Q6PIU1 500 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 TAF1DQ9H5J8 278 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 SUDS3Q9H7L9 328 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 POLLQ9UGP5 575 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 ATP8B3O60423 1300 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 NWD1Q149M9 1564 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 SPDYE16A6NNV3 312 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 TBXAS1P24557 533 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 FAM133BQ5BKY9 247 aaKnown RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 SCYL1Q96KG9 808 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 ESYT2A0FGR8 921 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 TYW5A2RUC4 315 aaKnown RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 GRID2IPA4D2P6 1211 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 FTLP02792 175 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 SRGAP2BP0DMP2 458 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 RNF139Q8WU17 664 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 AMACRQ9UHK6 382 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 AGO2Q9UKV8 859 aaKnown RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 DIS3Q9Y2L1 958 aaKnown RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 EMSYQ7Z589 1322 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 SSU72P8A0A1W2PR75 194 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 CHUKO15111 745 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 GMPSP49915 693 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 CDO1Q16878 200 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 CCNI2Q6ZMN8 369 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 PASD1Q8IV76 773 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 C11orf70Q9BRQ4 267 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 MYOZ2Q9NPC6 264 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 GGA3Q9NZ52 723 aa16.03■□□□□ 0.16
NPHP4-201ENST00000378156 IPO11Q9UI26 975 aaKnown RBP16.03■□□□□ 0.16
NPHP4-201ENST00000378156 FRMD3A2A2Y4 597 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 CPP00450 1065 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 PLEKP08567 350 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-201ENST00000378156 MAGOHP61326 146 aaKnown RBP16.02■□□□□ 0.16
NPHP4-201ENST00000378156 TAF11Q15544 211 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 XKR3Q5GH77 459 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 TXNRD3Q86VQ6 643 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 SCYL3Q8IZE3 742 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 GDAP1Q8TB36 358 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 SH2D3AQ9BRG2 576 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 DEFB129Q9H1M3 183 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 RBAKQ9NYW8 714 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-201ENST00000378156 DGAT1O75907 488 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms