RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 KDM5CP41229 1560 aa20.21■□□□□ 0.83
TBC1D4-201ENST00000377625 CPDO75976 1380 aa20.21■□□□□ 0.83
TBC1D4-201ENST00000377625 PMS2P54278 862 aa20.21■□□□□ 0.83
TBC1D4-201ENST00000377625 EIF2AQ9BY44 585 aaKnown RBP20.21■□□□□ 0.83
TBC1D4-201ENST00000377625 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
TBC1D4-201ENST00000377625 SP110Q9HB58 689 aa20.21■□□□□ 0.83
TBC1D4-201ENST00000377625 CAPN11Q9UMQ6 739 aa20.21■□□□□ 0.83
TBC1D4-201ENST00000377625 PNMA6AP0CW24 399 aaPredicted RBP20.21■□□□□ 0.83
TBC1D4-201ENST00000377625 TMCC1O94876 653 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 MOCS2O96007 188 aaPredicted RBP20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 KCNA1Q09470 495 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 CDHR2Q9BYE9 1310 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 CCDC195A0A1B0GUA6 201 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 CDC27P30260 824 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 MORF4L2Q15014 288 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 SLC9A2Q9UBY0 812 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 CPSF1Q10570 1443 aaKnown RBP20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 A8MXQ7 604 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 MYBL1P10243 752 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 FCER1AP12319 257 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 POLE2P56282 527 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 BCAR1P56945 870 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 DEUP1Q05D60 604 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 ASIC4Q96FT7 647 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 OTUD5Q96G74 571 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 BTBD6Q96KE9 485 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 ZFP69BQ9UJL9 534 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 GPS1Q13098 491 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 TTC39CQ8N584 583 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 SMYD3Q9H7B4 428 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 TRIM33Q9UPN9 1127 aa20.2■□□□□ 0.82
TBC1D4-201ENST00000377625 ROR1Q01973 937 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 LBRQ14739 615 aaKnown RBP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 ITPRIPL1Q6GPH6 555 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 RPAINQ86UA6 219 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 BPIFA3Q9BQP9 254 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 RBAKQ9NYW8 714 aaPredicted RBP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 RASSF3Q86WH2 238 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 FMR1NBQ8N0W7 255 aaPredicted RBP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 GPD1LQ8N335 351 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 NCK2O43639 380 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 ACCSLQ4AC99 568 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 ST13P4Q8IZP2 240 aaPredicted RBP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 EIF2AK1Q9BQI3 630 aaKnown RBP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 MTA3Q9BTC8 594 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 ZNF212Q9UDV6 495 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 TEKT2Q9UIF3 430 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 PP2D1A8MPX8 630 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 TBCCQ15814 346 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 FAM102AQ5T9C2 384 aaPredicted RBP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 CYFIP1Q7L576 1253 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 N4BP2L2Q92802 583 aaPredicted RBP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 DHX35Q9H5Z1 703 aaKnown RBP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 DDX56Q9NY93 547 aaKnown RBP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 TDP2O95551 362 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 NFRKBQ6P4R8 1299 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 OSBPL9Q96SU4 736 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 EGFL8Q99944 293 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 SPON2Q9BUD6 331 aa20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 SPATS2LQ9NUQ6 558 aaKnown RBP20.19■□□□□ 0.82
TBC1D4-201ENST00000377625 LMNAP02545 664 aaKnown RBP20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 MAGOHP61326 146 aaKnown RBP20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 PTK2BQ14289 1009 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 TTC23LQ6PF05 361 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 BRINP3Q76B58 766 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 CDKL3Q8IVW4 592 aaPredicted RBP20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 PLEKHG2Q9H7P9 1386 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 CHRNA3P32297 505 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 PRAMEP78395 509 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 PDIA2Q13087 525 aaKnown RBP20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 PPP4R4Q6NUP7 873 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 RHOT1Q8IXI2 618 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 LZICQ8WZA0 190 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 TRPV6Q9H1D0 765 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 SUFUQ9UMX1 484 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 DMTNQ08495 405 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 DCAF4L1Q3SXM0 396 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 BFARQ9NZS9 450 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 FARP1Q9Y4F1 1045 aaPredicted RBP20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 MYO5CQ9NQX4 1742 aa20.18■□□□□ 0.82
TBC1D4-201ENST00000377625 ADRA2BP18089 450 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.17■□□□□ 0.822e-7■■□□□ 14.4
TBC1D4-201ENST00000377625 SIK2Q9H0K1 926 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 KRT14P02533 472 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 ENOSF1Q7L5Y1 443 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 SPATA31A3Q5VYP0 1347 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 GYS2P54840 703 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 ALX1Q15699 326 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 GSPT2Q8IYD1 628 aaKnown RBP20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 ZBED8Q8IZ13 594 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 ARHGEF1Q92888 912 aaKnown RBP20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 ABTB1Q969K4 478 aaPredicted RBP20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 KIF12Q96FN5 646 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 KIFC3Q9BVG8 833 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 DDX47Q9H0S4 455 aaKnown RBP20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 PIDD1Q9HB75 910 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 MLXIPLQ9NP71 852 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 AGO2Q9UKV8 859 aaKnown RBP20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 TRIM49P0CI25 452 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms