RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 CNNM3Q8NE01 707 aa19.8■□□□□ 0.76
IRF3-202ENST00000377135 MCPH1Q8NEM0 835 aa19.8■□□□□ 0.76
IRF3-202ENST00000377135 GPRC5CQ9NQ84 441 aa19.8■□□□□ 0.76
IRF3-202ENST00000377135 TBC1D13Q9NVG8 400 aa19.8■□□□□ 0.76
IRF3-202ENST00000377135 CLEC1BQ9P126 229 aa19.8■□□□□ 0.76
IRF3-202ENST00000377135 ARHGEF35A5YM69 484 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 TSPAN1O60635 241 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 ZC3H11AO75152 810 aaKnown RBP eCLIP19.79■□□□□ 0.765e-8■■■■□ 20.6
IRF3-202ENST00000377135 MBTD1Q05BQ5 628 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 PLPP4Q5VZY2 271 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 NOTUMQ6P988 496 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 PADI6Q6TGC4 694 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 URGCPQ8TCY9 931 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 CPB2Q96IY4 423 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 TBC1D32Q96NH3 1257 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 CDCA3Q99618 268 aaPredicted RBP19.79■□□□□ 0.76
IRF3-202ENST00000377135 NFKBIZQ9BYH8 718 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 GBP3Q9H0R5 595 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 EPHX3Q9H6B9 360 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 NRDE2Q9H7Z3 1164 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 KANSL3Q9P2N6 904 aa19.79■□□□□ 0.76
IRF3-202ENST00000377135 H3BQV1 296 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 MBTPS2O43462 519 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 ALDH2P05091 517 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 GALTP07902 379 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 ITGA4P13612 1032 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 NCLP19338 710 aaKnown RBP19.78■□□□□ 0.76
IRF3-202ENST00000377135 MUTP22033 750 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 GJB2P29033 226 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 BMS1Q14692 1282 aaKnown RBP19.78■□□□□ 0.76
IRF3-202ENST00000377135 DUSP6Q16828 381 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 HAUS3Q68CZ6 603 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 MRPL43Q8N983 215 aaKnown RBP19.78■□□□□ 0.76
IRF3-202ENST00000377135 TMEM169Q96HH4 297 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 MSLNLQ96KJ4 702 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 RAB34Q9BZG1 259 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 RSAD1Q9HA92 442 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 UBN1Q9NPG3 1134 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 PRKAG3Q9UGI9 489 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 KIAA1024Q9UPX6 916 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 STK24Q9Y6E0 443 aa19.78■□□□□ 0.76
IRF3-202ENST00000377135 CARNS1A5YM72 827 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 LRRIQ4A6NIV6 560 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 HIDE1A8MVS5 230 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 CXCL14O95715 111 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 CYP11B2P19099 503 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 AFF1P51825 1210 aaKnown RBP19.77■□□□□ 0.76
IRF3-202ENST00000377135 SMAD4Q13485 552 aaKnown RBP19.77■□□□□ 0.76
IRF3-202ENST00000377135 SMAD2Q15796 467 aaKnown RBP19.77■□□□□ 0.76
IRF3-202ENST00000377135 ECM1Q16610 540 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 ZNF280BQ86YH2 543 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 SMG8Q8ND04 991 aaKnown RBP19.77■□□□□ 0.76
IRF3-202ENST00000377135 CCDC51Q96ER9 411 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 C1QTNF1Q9BXJ1 281 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 EIF2AQ9BY44 585 aaKnown RBP19.77■□□□□ 0.76
IRF3-202ENST00000377135 CSRNP2Q9H175 543 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 PLXNA4Q9HCM2 1894 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 SMC3Q9UQE7 1217 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 CNTNAP2Q9UHC6 1331 aa19.77■□□□□ 0.76
IRF3-202ENST00000377135 FSD2A1L4K1 749 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 LAD1O00515 517 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 EYA4O95677 639 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 GLP2RO95838 553 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 ARF4P18085 180 aaPredicted RBP19.76■□□□□ 0.75
IRF3-202ENST00000377135 RBM10P98175 930 aaKnown RBP19.76■□□□□ 0.75
IRF3-202ENST00000377135 COASYQ13057 564 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 AMHR2Q16671 573 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 RILPL1Q5EBL4 403 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 DTHD1Q6ZMT9 781 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 KHSRPQ92945 711 aaKnown RBP eCLIP19.76■□□□□ 0.75
IRF3-202ENST00000377135 IGSF21Q96ID5 467 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 FAM193BQ96PV7 902 aaPredicted RBP19.76■□□□□ 0.75
IRF3-202ENST00000377135 RNF39Q9H2S5 420 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 DNAJB4Q9UDY4 337 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 BARX2Q9UMQ3 279 aaPredicted RBP19.76■□□□□ 0.75
IRF3-202ENST00000377135 IPPQ9Y573 584 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 DDHD2O94830 711 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 POMCP01189 267 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 SMC1AQ14683 1233 aaKnown RBP19.76■□□□□ 0.75
IRF3-202ENST00000377135 IL17AQ16552 155 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 ADHFE1Q8IWW8 467 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 VPS52Q8N1B4 723 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 IGSF22Q8N9C0 903 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 TRIM6Q9C030 488 aaPredicted RBP19.76■□□□□ 0.75
IRF3-202ENST00000377135 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.76■□□□□ 0.75
IRF3-202ENST00000377135 HES2Q9Y543 173 aa19.76■□□□□ 0.75
IRF3-202ENST00000377135 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.76■□□□□ 0.75
IRF3-202ENST00000377135 ATG2AQ2TAZ0 1938 aa19.75■□□□□ 0.75
IRF3-202ENST00000377135 A0A1B0GUA9 196 aa19.75■□□□□ 0.75
IRF3-202ENST00000377135 B4GALT5O43286 388 aa19.75■□□□□ 0.75
IRF3-202ENST00000377135 CA8P35219 290 aa19.75■□□□□ 0.75
IRF3-202ENST00000377135 SLC11A1P49279 550 aa19.75■□□□□ 0.75
IRF3-202ENST00000377135 ZP2Q05996 745 aa19.75■□□□□ 0.75
IRF3-202ENST00000377135 KRT79Q5XKE5 535 aa19.75■□□□□ 0.75
IRF3-202ENST00000377135 LARP1BQ659C4 914 aaKnown RBP19.75■□□□□ 0.75
IRF3-202ENST00000377135 TMEM184AQ6ZMB5 413 aa19.75■□□□□ 0.75
IRF3-202ENST00000377135 DDX53Q86TM3 631 aaKnown RBP19.75■□□□□ 0.75
IRF3-202ENST00000377135 TMEM173Q86WV6 379 aaPredicted RBP19.75■□□□□ 0.75
IRF3-202ENST00000377135 ZBTB8OSQ8IWT0 167 aa19.75■□□□□ 0.75
IRF3-202ENST00000377135 TMEM87AQ8NBN3 555 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms