RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 ATG4AQ8WYN0 398 aa13.66□□□□□ -0.22
DDR1-226ENST00000376569 MYOZ2Q9NPC6 264 aa13.66□□□□□ -0.22
DDR1-226ENST00000376569 TMX2Q9Y320 296 aa13.66□□□□□ -0.22
DDR1-226ENST00000376569 ALG6Q9Y672 507 aa13.66□□□□□ -0.22
DDR1-226ENST00000376569 CLDN3O15551 220 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 NR3C2P08235 984 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 MFAP3P55082 362 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 SGO2Q562F6 1265 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 SLC47A2Q86VL8 602 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 ARHGEF19Q8IW93 802 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 USP38Q8NB14 1042 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 GDAP1Q8TB36 358 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 KCTD10Q9H3F6 313 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 WRAP73Q9P2S5 460 aaPredicted RBP13.65□□□□□ -0.22
DDR1-226ENST00000376569 RAB21Q9UL25 225 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 CHD4Q14839 1912 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 GOLGA8KD6RF30 607 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 POC1B-GALNT4F8VUJ3 575 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 SNHG28P0DPA3 235 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 GMPSP49915 693 aaPredicted RBP13.65□□□□□ -0.22
DDR1-226ENST00000376569 SNRNP35Q16560 246 aaKnown RBP13.65□□□□□ -0.22
DDR1-226ENST00000376569 HGSNATQ68CP4 663 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
DDR1-226ENST00000376569 TPCN2Q8NHX9 752 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 SLC7A3Q8WY07 619 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 AGPAT1Q99943 283 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.65□□□□□ -0.223e-6■■■□□ 17.9
DDR1-226ENST00000376569 PLVAPQ9BX97 442 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 AZI2Q9H6S1 392 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 ZNF148Q9UQR1 794 aa13.65□□□□□ -0.22
DDR1-226ENST00000376569 CTNND1O60716 968 aaKnown RBP13.65□□□□□ -0.23
DDR1-226ENST00000376569 MMEP08473 750 aa13.65□□□□□ -0.23
DDR1-226ENST00000376569 ORC2Q13416 577 aaPredicted RBP13.65□□□□□ -0.23
DDR1-226ENST00000376569 INTS8Q75QN2 995 aaKnown RBP13.65□□□□□ -0.23
DDR1-226ENST00000376569 APOL6Q9BWW8 343 aa13.65□□□□□ -0.23
DDR1-226ENST00000376569 ASTN1O14525 1302 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 ECM29Q5VYK3 1845 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 WDR64B1ANS9 1081 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 TGFB1I1O43294 461 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 CNGA1P29973 690 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 MARCKSL1P49006 195 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 IRAK1P51617 712 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 TKFCQ3LXA3 575 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 BRDTQ58F21 947 aaPredicted RBP13.64□□□□□ -0.23
DDR1-226ENST00000376569 TMEM206Q9H813 350 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 RNF19AQ9NV58 838 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 MYH3P11055 1940 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 COMTP21964 271 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 PPP3CAQ08209 521 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 Q3C1V9 767 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 GNPTABQ3T906 1256 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 ZNF772Q68DY9 489 aaPredicted RBP13.64□□□□□ -0.23
DDR1-226ENST00000376569 LRRC31Q6UY01 552 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 CPNE8Q86YQ8 564 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 ARFGAP2Q8N6H7 521 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 TAS1R2Q8TE23 839 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 TATDN2Q93075 761 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 C18orf8Q96DM3 657 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
DDR1-226ENST00000376569 PLCD4Q9BRC7 762 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 RAB17Q9H0T7 212 aa13.64□□□□□ -0.23
DDR1-226ENST00000376569 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
DDR1-226ENST00000376569 F5H423 210 aaPredicted RBP13.63□□□□□ -0.23
DDR1-226ENST00000376569 MAP2K7O14733 419 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 HDLBPQ00341 1268 aaKnown RBP13.63□□□□□ -0.23
DDR1-226ENST00000376569 FIGNQ5HY92 759 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 SCYL2Q6P3W7 929 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 ZNF564Q8TBZ8 553 aaPredicted RBP13.63□□□□□ -0.23
DDR1-226ENST00000376569 HNRNPLLQ8WVV9 542 aaKnown RBP13.63□□□□□ -0.23
DDR1-226ENST00000376569 PITPNM2Q9BZ72 1349 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 RUFY4Q6ZNE9 571 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 ATP6V0A1Q93050 837 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 GMCL1Q96IK5 515 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 PBKQ96KB5 322 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 IDI2Q9BXS1 227 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 STK33Q9BYT3 514 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 POLR3FQ9H1D9 316 aaPredicted RBP13.63□□□□□ -0.23
DDR1-226ENST00000376569 HACL1Q9UJ83 578 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 DBR1Q9UK59 544 aaKnown RBP13.63□□□□□ -0.23
DDR1-226ENST00000376569 SYNJ2BP-COX16A0A087WUM0 186 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 GPC5P78333 572 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 WDR93Q6P2C0 686 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 RFFLQ8WZ73 363 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 KRT35Q92764 455 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 MSTO1Q9BUK6 570 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 TARS2Q9BW92 718 aaKnown RBP13.63□□□□□ -0.23
DDR1-226ENST00000376569 VPS37BQ9H9H4 285 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 COX16Q9P0S2 106 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 UBR2Q8IWV8 1755 aa13.63□□□□□ -0.23
DDR1-226ENST00000376569 F8VZ95 297 aa13.62□□□□□ -0.23
DDR1-226ENST00000376569 SYF2O95926 243 aaKnown RBP13.62□□□□□ -0.23
DDR1-226ENST00000376569 ERVK-9P63128 1117 aa13.62□□□□□ -0.23
DDR1-226ENST00000376569 UGCGQ16739 394 aa13.62□□□□□ -0.23
DDR1-226ENST00000376569 C10orf76Q5T2E6 689 aa13.62□□□□□ -0.23
DDR1-226ENST00000376569 MCTP2Q6DN12 878 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms