RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 ANKRD42Q8N9B4 389 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 KLHL23Q8NBE8 558 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 RMDN2Q96LZ7 410 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 FAM167BQ9BTA0 163 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 CARD9Q9H257 536 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 USP40Q9NVE5 1235 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 SLC5A4Q9NY91 659 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 USP15Q9Y4E8 981 aaPredicted RBP12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 KDM3AQ9Y4C1 1321 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 WNK3Q9BYP7 1800 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 UNCXA6NJT0 531 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 RASGRF2O14827 1237 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 LRRN2O75325 713 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 TMEM253P0C7T8 217 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 SMARCA1P28370 1054 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 GCKP35557 465 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 SOX5P35711 763 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 STAT1P42224 750 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 PPP4CP60510 307 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 ADCY1Q08828 1119 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 GRIK3Q13003 919 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 MPP2Q14168 576 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 TNFAIP8L3Q5GJ75 292 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 SLC30A10Q6XR72 485 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 CTNNBL1Q8WYA6 563 aaPredicted RBP12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 KLHL29Q96CT2 875 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 YIPF2Q9BWQ6 316 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 DNAJC17Q9NVM6 304 aaKnown RBP12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 NOP53Q9NZM5 478 aaKnown RBP12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 DNAJC12Q9UKB3 198 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 INTUQ9ULD6 942 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 ALG6Q9Y672 507 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 GOLGA6L10A0A0M3HER8 536 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 FAM187AA6NFU0 413 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 AKR1B1P15121 316 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 FERP16591 822 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 INHBEP58166 350 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 COPS2P61201 443 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 ADCY2Q08462 1091 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 MGAT5Q09328 741 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 BNIP1Q12981 228 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 TNIP1Q15025 636 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 SETDB1Q15047 1291 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 ARHGAP44Q17R89 818 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 NUGGCQ68CJ6 796 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 KCTD1Q719H9 257 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 ANKLE1Q8NAG6 615 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 SLC20A1Q8WUM9 679 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 DYDC1Q8WWB3 177 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 P2RX7Q99572 595 aaKnown RBP12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 SYT11Q9BT88 431 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 RUSC1Q9BVN2 902 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 TMEM120BA0PK00 339 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 GCNT3O95395 438 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 ACSL3O95573 720 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 CYP4A11Q02928 519 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 CBWD6Q4V339 395 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 CBWD3Q5JTY5 395 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 CBWD5Q5RIA9 395 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 CGB2Q6NT52 195 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 VSTM1Q6UX27 236 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 SLC17A8Q8NDX2 589 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 ANKRD2Q9GZV1 360 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 ADAM22Q9P0K1 906 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 PFASO15067 1338 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 PHF2O75151 1096 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 TRIM49P0CI25 452 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 TRIM49CP0CI26 452 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 ADRA2BP18089 450 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 DHX34Q14147 1143 aaKnown RBP12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 ZC2HC1CQ53FD0 456 aaPredicted RBP12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 PSTPIP2Q9H939 334 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 MTMR4Q9NYA4 1195 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 ANKIB1Q9P2G1 1089 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 SRP68Q9UHB9 627 aaKnown RBP12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
TM9SF2-201ENST00000376387 PNMA6FA0A0J9YX94 578 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 TGFB1I1O43294 461 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 KCNQ2O43526 872 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 CALUO43852 315 aaPredicted RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 SMNDC1O75940 238 aaKnown RBP eCLIP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 SPATA31C1P0DKV0 1188 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 HOXA7P31268 230 aaPredicted RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 PDE6CP51160 858 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 RNASELQ05823 741 aaKnown RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 NFIXQ14938 502 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 CDCA2Q69YH5 1023 aaPredicted RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 CCDC137Q6PK04 289 aaKnown RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 TBC1D16Q8TBP0 767 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 ZNF483Q8TF39 744 aaPredicted RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 CNOT7Q9UIV1 285 aaKnown RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 NHSQ6T4R5 1651 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 ENO4A6NNW6 628 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 PDXKO00764 312 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 TOM1O60784 492 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 TAL1P17542 331 aaPredicted RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 MSH2P43246 934 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 ZNF746Q6NUN9 644 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms